Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.6□□□□□ -1.03
MTHFRP42898 HNRNPA1-204ENST00000547276 1539 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 CNOT4-207ENST00000451834 3507 ntAPPRIS ALT1 TSL 2 BASIC8.59□□□□□ -1.03
MTHFRP42898 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
MTHFRP42898 FYTTD1-203ENST00000415708 1342 ntTSL 2 BASIC8.59□□□□□ -1.03
MTHFRP42898 AC133485.2-201ENST00000566232 2484 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.59□□□□□ -1.03
MTHFRP42898 TNR-202ENST00000367674 12949 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 MYO5C-201ENST00000261839 6971 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 RNA5SP141-201ENST00000364543 120 ntBASIC8.59□□□□□ -1.03
MTHFRP42898 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC8.59□□□□□ -1.03
MTHFRP42898 PPP1R17-202ENST00000409146 569 ntTSL 2 BASIC8.59□□□□□ -1.03
MTHFRP42898 MRPS31P5-202ENST00000423686 920 ntBASIC8.59□□□□□ -1.03
MTHFRP42898 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 LINC02530-201ENST00000457945 894 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 RN7SL647P-201ENST00000485429 300 ntBASIC8.59□□□□□ -1.03
MTHFRP42898 RN7SL124P-201ENST00000498656 285 ntBASIC8.59□□□□□ -1.03
MTHFRP42898 AL135934.1-201ENST00000527684 537 ntTSL 2 BASIC8.59□□□□□ -1.03
MTHFRP42898 AC009269.2-201ENST00000559892 474 ntBASIC8.59□□□□□ -1.03
MTHFRP42898 MED31-202ENST00000574128 619 ntTSL 3 BASIC8.59□□□□□ -1.03
MTHFRP42898 AC105227.1-201ENST00000586227 438 ntTSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.59□□□□□ -1.03
MTHFRP42898 LINC00632-203ENST00000602535 723 ntTSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 MIR6745-201ENST00000612694 127 ntBASIC8.59□□□□□ -1.03
MTHFRP42898 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 LINC01359-205ENST00000634604 1050 ntTSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 AF121897.1-201ENST00000411867 3980 ntBASIC8.59□□□□□ -1.03
MTHFRP42898 ZNF649-201ENST00000354957 3197 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 BTBD3-214ENST00000618296 4582 ntAPPRIS ALT1 TSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 GBA3-203ENST00000508166 2164 ntAPPRIS P5 TSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.59□□□□□ -1.03
MTHFRP42898 SUPT7L-201ENST00000337768 4488 ntAPPRIS P3 TSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 ABCA9-202ENST00000453985 6116 ntTSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 MYO10-201ENST00000274203 11456 ntAPPRIS ALT2 TSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 RAB11A-209ENST00000569896 1396 ntTSL 2 BASIC8.59□□□□□ -1.03
MTHFRP42898 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC8.59□□□□□ -1.03
MTHFRP42898 CCDC63-204ENST00000552694 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.03
MTHFRP42898 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.04
MTHFRP42898 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC8.59□□□□□ -1.04
MTHFRP42898 ATAD2-205ENST00000521903 5143 ntTSL 1 (best) BASIC8.59□□□□□ -1.04
MTHFRP42898 GCNT3-201ENST00000396065 4933 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 APOL3-202ENST00000361710 3563 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 PECAM1-203ENST00000563924 6831 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 CRNKL1-202ENST00000377340 4406 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 AC010200.1-201ENST00000547380 1454 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 NXF5-205ENST00000473265 1348 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 MR1-205ENST00000434571 7479 ntTSL 5 BASIC8.58□□□□□ -1.04
MTHFRP42898 ZNF174-203ENST00000571936 1586 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
MTHFRP42898 CAP1-201ENST00000340450 2592 ntAPPRIS ALT1 TSL 5 BASIC8.58□□□□□ -1.04
MTHFRP42898 C6orf89-202ENST00000359359 2565 ntTSL 5 BASIC8.58□□□□□ -1.04
MTHFRP42898 ABI1-209ENST00000376166 3441 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 MBNL3-203ENST00000370849 1444 ntTSL 2 BASIC8.58□□□□□ -1.04
MTHFRP42898 AC074375.1-201ENST00000372993 192 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 MIR181C-201ENST00000384881 110 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 PHBP1-201ENST00000392260 808 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 GRPEL2P2-201ENST00000421856 670 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 OR52J2P-201ENST00000427973 939 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 AC079944.1-201ENST00000485426 495 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 AC114300.1-201ENST00000502347 280 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 CKMT2-AS1-206ENST00000511495 585 ntTSL 4 BASIC8.58□□□□□ -1.04
MTHFRP42898 AC091839.1-201ENST00000513087 269 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 RNU2-45P-201ENST00000516068 187 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 AC138356.2-201ENST00000521192 667 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 AC090568.2-203ENST00000521433 579 ntTSL 4 BASIC8.58□□□□□ -1.04
MTHFRP42898 AEBP2-207ENST00000541908 975 ntAPPRIS ALT2 TSL 3 BASIC8.58□□□□□ -1.04
MTHFRP42898 AC005537.1-202ENST00000585996 666 ntTSL 5 BASIC8.58□□□□□ -1.04
MTHFRP42898 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC8.58□□□□□ -1.04
MTHFRP42898 AL031429.2-201ENST00000602605 649 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 AL137190.1-201ENST00000603288 282 ntBASIC8.58□□□□□ -1.04
MTHFRP42898 LINC02532-210ENST00000606430 584 ntTSL 4 BASIC8.58□□□□□ -1.04
MTHFRP42898 OR10G8-202ENST00000641224 1033 ntAPPRIS P1 BASIC8.58□□□□□ -1.04
MTHFRP42898 FOLH1B-201ENST00000525540 1974 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 PTPN3-204ENST00000446349 8630 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 CPNE8-201ENST00000331366 3489 ntAPPRIS P2 TSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 MAP4K4-201ENST00000302217 6624 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 HBS1L-205ENST00000367837 7163 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 NCOA4-201ENST00000578454 2307 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 STARD5-201ENST00000302824 4871 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
MTHFRP42898 BUB1B-202ENST00000412359 3628 ntTSL 2 BASIC8.58□□□□□ -1.04
MTHFRP42898 NELL1-201ENST00000298925 3329 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
MTHFRP42898 AC006269.1-201ENST00000636752 2789 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
MTHFRP42898 R3HDM2P1-201ENST00000505381 1960 ntBASIC8.57□□□□□ -1.04
MTHFRP42898 AC007066.2-201ENST00000561961 1993 ntTSL 2 BASIC8.57□□□□□ -1.04
MTHFRP42898 CCDC162P-214ENST00000640755 1958 ntTSL 5 BASIC8.57□□□□□ -1.04
MTHFRP42898 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC8.57□□□□□ -1.04
MTHFRP42898 AC007126.1-201ENST00000508202 4781 ntBASIC8.57□□□□□ -1.04
MTHFRP42898 ZBTB20-AS1-203ENST00000475939 1687 ntTSL 2 BASIC8.57□□□□□ -1.04
MTHFRP42898 PREPL-208ENST00000410081 3080 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
MTHFRP42898 ATP5J2-201ENST00000292475 607 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 METTL5-202ENST00000308099 629 ntTSL 3 BASIC8.57□□□□□ -1.04
MTHFRP42898 OR7D4-201ENST00000308682 1022 ntAPPRIS P1 BASIC8.57□□□□□ -1.04
MTHFRP42898 HHLA3-203ENST00000370940 775 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
MTHFRP42898 AL160290.1-201ENST00000415509 416 ntTSL 3 BASIC8.57□□□□□ -1.04
MTHFRP42898 OR52U1P-201ENST00000439752 923 ntBASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms