Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 MRPS31P5-201ENST00000416599 3494 ntTSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 MSANTD3-206ENST00000613183 1755 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AC105760.1-201ENST00000244820 2231 ntTSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 BTN3A3-201ENST00000244519 3002 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 LAX1-202ENST00000367217 1356 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 EYA4-201ENST00000355167 5692 ntTSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 OR8D4-202ENST00000641687 2904 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 NFASC-204ENST00000401399 10205 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 APP-209ENST00000440126 2846 ntTSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 OR2T4-201ENST00000366473 963 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 OR2T4-202ENST00000366475 1047 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 CDH13-203ENST00000431540 831 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 BSNDP4-201ENST00000436076 388 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AC093157.1-205ENST00000449473 1298 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 FGF12-206ENST00000450716 768 ntTSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 SNX18P8-201ENST00000455120 874 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AZI2-207ENST00000457172 1136 ntTSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 ZBTB20-AS4-201ENST00000472323 675 ntTSL 3 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 RN7SL65P-201ENST00000485221 315 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 LINC02057-201ENST00000503882 640 ntTSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 TXK-203ENST00000507351 1153 ntTSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AC034232.2-201ENST00000511579 917 ntTSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 TRIM6-211ENST00000515022 1060 ntTSL 2 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AC091563.1-201ENST00000520544 490 ntTSL 3 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 LRTOMT-212ENST00000536917 579 ntTSL 3 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 CCDC32-203ENST00000558113 576 ntTSL 3 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 CCDC32-210ENST00000559911 677 ntTSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 CCDC32-212ENST00000560305 557 ntTSL 4 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AC034105.2-201ENST00000561866 238 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 CDH13-207ENST00000565636 810 ntTSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 OR1P1-201ENST00000571766 994 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AC004918.3-201ENST00000602609 925 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AL133351.5-201ENST00000612789 106 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 ZNF365-211ENST00000614806 877 ntTSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AL731556.2-201ENST00000615610 770 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 MALAT1-208ENST00000616527 572 ntTSL 3 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 Metazoa_SRP.212-201ENST00000636778 248 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 IL24-207ENST00000611909 1621 ntTSL 3 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 ZNF568-215ENST00000617745 2441 ntTSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AC025569.1-202ENST00000548687 5903 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AC020904.2-202ENST00000614660 1401 ntBASIC8.53□□□□□ -1.04
LMO3Q8TAP4 L1TD1-201ENST00000498273 3849 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 NAV1-202ENST00000367296 13091 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 CWC27-204ENST00000508024 2103 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 FO393401.2-201ENST00000422009 1307 ntTSL 5 BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 AOAH-210ENST00000617267 2398 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
LMO3Q8TAP4 CREM-212ENST00000374728 1933 ntTSL 5 BASIC8.52□□□□□ -1.04
LMO3Q8TAP4 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.52□□□□□ -1.04
LMO3Q8TAP4 AC093117.1-201ENST00000413541 2171 ntTSL 2 BASIC8.52□□□□□ -1.04
LMO3Q8TAP4 ZNF300P1-201ENST00000356555 1822 ntBASIC8.52□□□□□ -1.04
LMO3Q8TAP4 MORF4L2-210ENST00000451301 1830 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.04
LMO3Q8TAP4 GCSAML-204ENST00000463359 1822 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.04
LMO3Q8TAP4 SOSTDC1-202ENST00000396652 2411 ntTSL 2 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 ADA2-204ENST00000399839 3986 ntAPPRIS P3 TSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 CLCN5-204ENST00000376108 2660 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 ZEB2-236ENST00000636471 9583 ntTSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 HPSE2-204ENST00000404542 3681 ntTSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 RNA5SP71-201ENST00000362967 126 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 YBX1P8-201ENST00000421881 943 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AL162595.2-201ENST00000430677 792 ntTSL 3 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AL022721.1-201ENST00000436521 505 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 RN7SL201P-201ENST00000482306 296 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 SERPINB5-205ENST00000489441 1268 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC114786.3-201ENST00000509304 705 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC115837.1-201ENST00000517662 1001 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 IGHVII-22-1-201ENST00000517888 265 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 IGKV3D-31-201ENST00000519131 281 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AP003041.2-201ENST00000525666 1180 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AP000793.1-201ENST00000527364 740 ntTSL 3 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC044839.1-209ENST00000529769 878 ntTSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC027020.1-201ENST00000559349 632 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC068152.1-202ENST00000571901 808 ntTSL 3 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 RN7SL123P-201ENST00000577239 292 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC110921.1-201ENST00000577544 612 ntTSL 3 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC090358.1-201ENST00000579862 852 ntTSL 3 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC026468.1-201ENST00000614981 107 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 CU634019.6-201ENST00000623165 710 ntTSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC025287.4-201ENST00000640173 1240 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 NHSL2-207ENST00000633930 13660 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 CTNND1-208ENST00000428599 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 CTNND1-232ENST00000532649 6026 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC116366.1-201ENST00000443093 3730 ntTSL 5 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 EYA4-213ENST00000531901 2892 ntAPPRIS ALT2 TSL 2 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 AC073324.1-201ENST00000425993 1435 ntBASIC8.52□□□□□ -1.05
LMO3Q8TAP4 OXCT1-205ENST00000510634 1441 ntTSL 2 BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 CKAP2L-201ENST00000302450 4533 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 SPTAN1-202ENST00000372731 7889 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 NDE1-202ENST00000396355 3936 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
LMO3Q8TAP4 FUT10-206ENST00000518672 3115 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 PPIP5K2-202ENST00000358359 5813 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
LMO3Q8TAP4 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms