Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 GREB1-210ENST00000628795 438 ntTSL 53.13□□□□□ -1.913e-7■■□□□ 13
PRPF8Q6P2Q9 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC18.94■□□□□ 0.622e-6■■□□□ 13
PRPF8Q6P2Q9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.252e-6■■□□□ 13
PRPF8Q6P2Q9 NRBP1-206ENST00000460499 2561 ntTSL 211.64□□□□□ -0.558e-7■■□□□ 13
PRPF8Q6P2Q9 BZW1-210ENST00000460660 265 ntTSL 1 (best)6.58□□□□□ -1.369e-8■■□□□ 13
PRPF8Q6P2Q9 ERBB3-214ENST00000550070 2729 ntTSL 1 (best)7.56□□□□□ -1.26e-7■■□□□ 13
PRPF8Q6P2Q9 DHX38-212ENST00000569935 907 ntTSL 213.57□□□□□ -0.242e-9■■□□□ 13
PRPF8Q6P2Q9 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.327e-7■■□□□ 13
PRPF8Q6P2Q9 BTBD2-204ENST00000587825 961 ntTSL 510.01□□□□□ -0.817e-7■■□□□ 13
PRPF8Q6P2Q9 USP6NL-204ENST00000606752 1823 ntTSL 1 (best)17.18■□□□□ 0.341e-7■■□□□ 13
PRPF8Q6P2Q9 ANXA4-203ENST00000418066 905 ntTSL 35.74□□□□□ -1.492e-22■■□□□ 13
PRPF8Q6P2Q9 DNMT1-221ENST00000589538 559 ntTSL 513.87□□□□□ -0.193e-7■■□□□ 13
PRPF8Q6P2Q9 EPS8L3-206ENST00000477568 493 ntTSL 49.94□□□□□ -0.822e-7■■□□□ 13
PRPF8Q6P2Q9 SMOX-208ENST00000484515 900 ntTSL 320.86■□□□□ 0.934e-8■■□□□ 13
PRPF8Q6P2Q9 ANXA2-235ENST00000560546 574 ntTSL 24.52□□□□□ -1.692e-10■■□□□ 13
PRPF8Q6P2Q9 CEP95-215ENST00000582698 442 ntTSL 2-0.24□□□□□ -2.452e-10■■□□□ 13
PRPF8Q6P2Q9 D2HGDH-207ENST00000437164 269 ntTSL 511.99□□□□□ -0.493e-7■■□□□ 13
PRPF8Q6P2Q9 D2HGDH-204ENST00000417686 454 ntTSL 511.86□□□□□ -0.513e-7■■□□□ 13
PRPF8Q6P2Q9 DMKN-227ENST00000466587 325 ntTSL 59.82□□□□□ -0.847e-7■■□□□ 13
PRPF8Q6P2Q9 GUK1-223ENST00000478725 414 ntTSL 311.7□□□□□ -0.541e-7■■□□□ 13
PRPF8Q6P2Q9 NME2-203ENST00000485076 554 ntTSL 1 (best)14.36□□□□□ -0.117e-26■■□□□ 13
PRPF8Q6P2Q9 HNRNPA1-211ENST00000551665 925 ntTSL 27.11□□□□□ -1.271e-6■■□□□ 13
PRPF8Q6P2Q9 HNRNPA1-214ENST00000551803 372 ntTSL 32.39□□□□□ -2.031e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.284e-6■■□□□ 13
PRPF8Q6P2Q9 AC005324.4-202ENST00000585171 631 ntTSL 313.16□□□□□ -0.34e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC12.22□□□□□ -0.454e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-213ENST00000580393 541 ntTSL 411.91□□□□□ -0.54e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.534e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-212ENST00000580259 527 ntTSL 4 BASIC11.64□□□□□ -0.554e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-216ENST00000583031 402 ntTSL 511.63□□□□□ -0.554e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC11.63□□□□□ -0.554e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-207ENST00000578258 453 ntTSL 311.51□□□□□ -0.574e-6■■□□□ 13
PRPF8Q6P2Q9 AC005324.4-204ENST00000413242 4262 ntAPPRIS P5 TSL 2 BASIC9.88□□□□□ -0.834e-6■■□□□ 13
PRPF8Q6P2Q9 AC005324.4-203ENST00000583675 620 ntTSL 59.47□□□□□ -0.894e-6■■□□□ 13
PRPF8Q6P2Q9 AC005324.4-201ENST00000412988 2015 ntAPPRIS ALT2 TSL 29.23□□□□□ -0.934e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.994e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-214ENST00000581529 560 ntTSL 4 BASIC7.89□□□□□ -1.154e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC7.44□□□□□ -1.224e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-202ENST00000395894 5443 ntTSL 1 (best) BASIC6.3□□□□□ -1.44e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-205ENST00000472486 827 ntTSL 2 BASIC5.76□□□□□ -1.494e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-206ENST00000481540 427 ntTSL 1 (best)1.26□□□□□ -2.214e-6■■□□□ 13
PRPF8Q6P2Q9 ZNF286A-210ENST00000579694 574 ntTSL 51.21□□□□□ -2.224e-6■■□□□ 13
PRPF8Q6P2Q9 MRPL10-206ENST00000466016 544 ntTSL 221.22■□□□□ 0.991e-16■■□□□ 13
PRPF8Q6P2Q9 MRPL10-205ENST00000423147 612 ntTSL 419.05■□□□□ 0.641e-16■■□□□ 13
PRPF8Q6P2Q9 MRPL10-207ENST00000480901 578 ntTSL 419.05■□□□□ 0.641e-16■■□□□ 13
PRPF8Q6P2Q9 NSD2-223ENST00000513726 648 ntTSL 39.71□□□□□ -0.861e-8■■□□□ 13
PRPF8Q6P2Q9 NSD2-225ENST00000514329 851 ntTSL 310.83□□□□□ -0.684e-7■■□□□ 13
PRPF8Q6P2Q9 CDK10-216ENST00000561477 535 ntTSL 313.22□□□□□ -0.296e-9■■□□□ 13
PRPF8Q6P2Q9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.562e-6■■□□□ 13
PRPF8Q6P2Q9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.432e-6■■□□□ 13
PRPF8Q6P2Q9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC13.96□□□□□ -0.172e-6■■□□□ 13
PRPF8Q6P2Q9 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.562e-6■■□□□ 13
PRPF8Q6P2Q9 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.67□□□□□ -0.227e-7■■□□□ 13
PRPF8Q6P2Q9 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.237e-7■■□□□ 13
PRPF8Q6P2Q9 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.457e-7■■□□□ 13
PRPF8Q6P2Q9 HAGH-211ENST00000569339 820 ntTSL 320.84■□□□□ 0.936e-7■■□□□ 13
PRPF8Q6P2Q9 HAGH-212ENST00000569700 1156 ntTSL 1 (best)16.61■□□□□ 0.256e-7■■□□□ 13
PRPF8Q6P2Q9 SFXN4-202ENST00000369131 1133 ntTSL 520.25■□□□□ 0.832e-7■■□□□ 13
PRPF8Q6P2Q9 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.582e-7■■□□□ 13
PRPF8Q6P2Q9 SFXN4-204ENST00000461438 1029 ntTSL 55.59□□□□□ -1.512e-7■■□□□ 13
PRPF8Q6P2Q9 SFXN4-206ENST00000466218 764 ntTSL 55.25□□□□□ -1.572e-7■■□□□ 13
PRPF8Q6P2Q9 ROGDI-216ENST00000592112 968 ntTSL 220.25■□□□□ 0.835e-8■■□□□ 13
PRPF8Q6P2Q9 SPHK1-204ENST00000587167 456 ntTSL 416.34■□□□□ 0.211e-13■■□□□ 13
PRPF8Q6P2Q9 YIPF3-206ENST00000460903 605 ntTSL 213.96□□□□□ -0.182e-10■■□□□ 13
PRPF8Q6P2Q9 NADSYN1-208ENST00000527227 799 ntTSL 316.99■□□□□ 0.313e-9■■□□□ 13
PRPF8Q6P2Q9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.352e-6■■□□□ 13
PRPF8Q6P2Q9 THAP7-206ENST00000476667 1671 ntTSL 516.16■□□□□ 0.182e-6■■□□□ 13
PRPF8Q6P2Q9 THAP7-203ENST00000466670 1080 ntTSL 516.13■□□□□ 0.172e-6■■□□□ 13
PRPF8Q6P2Q9 THAP7-208ENST00000498406 1957 ntTSL 215.95■□□□□ 0.142e-6■■□□□ 13
PRPF8Q6P2Q9 THAP7-204ENST00000471073 1809 ntTSL 215.09■□□□□ 0.012e-6■■□□□ 13
PRPF8Q6P2Q9 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.142e-6■■□□□ 13
PRPF8Q6P2Q9 THAP7-207ENST00000488975 507 ntTSL 512.26□□□□□ -0.452e-6■■□□□ 13
PRPF8Q6P2Q9 PFKL-204ENST00000460521 2818 ntTSL 211.59□□□□□ -0.556e-7■■□□□ 13
PRPF8Q6P2Q9 GSDMD-208ENST00000528475 2067 ntTSL 217.24■□□□□ 0.351e-7■■□□□ 13
PRPF8Q6P2Q9 GSDMD-215ENST00000534018 1101 ntTSL 514.4□□□□□ -0.15e-8■■□□□ 13
PRPF8Q6P2Q9 TRMT11-203ENST00000444121 617 ntTSL 214.02□□□□□ -0.161e-9■■□□□ 13
PRPF8Q6P2Q9 TRMT11-208ENST00000473273 258 ntTSL 56.26□□□□□ -1.411e-9■■□□□ 13
PRPF8Q6P2Q9 ACSF2-218ENST00000510410 1745 ntTSL 219.2■□□□□ 0.661e-6■■□□□ 13
PRPF8Q6P2Q9 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC16.64■□□□□ 0.251e-6■■□□□ 13
PRPF8Q6P2Q9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC16.5■□□□□ 0.231e-6■■□□□ 13
PRPF8Q6P2Q9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.251e-6■■□□□ 13
PRPF8Q6P2Q9 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.28□□□□□ -0.441e-6■■□□□ 13
PRPF8Q6P2Q9 NFKBIZ-205ENST00000465476 806 ntTSL 38.35□□□□□ -1.079e-8■■□□□ 13
PRPF8Q6P2Q9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.184e-7■■□□□ 13
PRPF8Q6P2Q9 GSTP1-205ENST00000494593 1681 ntTSL 215.92■□□□□ 0.144e-7■■□□□ 13
PRPF8Q6P2Q9 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC11.93□□□□□ -0.54e-7■■□□□ 13
PRPF8Q6P2Q9 POLD2-214ENST00000481104 541 ntTSL 218.22■□□□□ 0.512e-8■■□□□ 13
PRPF8Q6P2Q9 PIP5K1C-204ENST00000587482 1311 ntTSL 513.75□□□□□ -0.218e-7■■□□□ 13
PRPF8Q6P2Q9 ANP32A-201ENST00000267918 1084 ntTSL 312.63□□□□□ -0.396e-7■■□□□ 13
PRPF8Q6P2Q9 ANP32A-206ENST00000483551 3711 ntTSL 57.67□□□□□ -1.186e-7■■□□□ 13
PRPF8Q6P2Q9 STK16-213ENST00000496800 1243 ntTSL 216.97■□□□□ 0.311e-6■■□□□ 13
PRPF8Q6P2Q9 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.161e-6■■□□□ 13
PRPF8Q6P2Q9 STK16-212ENST00000496443 2094 ntTSL 215.36■□□□□ 0.051e-6■■□□□ 13
PRPF8Q6P2Q9 STK16-208ENST00000475696 1513 ntTSL 215.32■□□□□ 0.041e-6■■□□□ 13
PRPF8Q6P2Q9 STK16-203ENST00000409516 895 ntTSL 2 BASIC11.74□□□□□ -0.531e-6■■□□□ 13
PRPF8Q6P2Q9 STK16-202ENST00000409260 1493 ntTSL 5 BASIC11.21□□□□□ -0.621e-6■■□□□ 13
PRPF8Q6P2Q9 STK16-209ENST00000478018 1930 ntTSL 29.91□□□□□ -0.821e-6■■□□□ 13
PRPF8Q6P2Q9 STK16-205ENST00000409743 1069 ntTSL 5 BASIC9.03□□□□□ -0.961e-6■■□□□ 13
PRPF8Q6P2Q9 STK16-204ENST00000409638 2868 ntAPPRIS P1 TSL 1 (best) BASIC7.8□□□□□ -1.161e-6■■□□□ 13
PRPF8Q6P2Q9 NOL9-205ENST00000464665 731 ntTSL 316.51■□□□□ 0.231e-8■■□□□ 13
Retrieved 100 of 73,762 protein–RNA pairs in 1256 ms