RNA–Protein interactions for RNA: ENST00000461438.5

SFXN4-204, Transcript of sideroflexin 4, humanhuman

TSL 5

Gene SFXN4, Length 1,029 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN4-204ENST00000461438 AEBP2Q6ZN18 517 aaPredicted RBP22.08■■□□□ 1.13
SFXN4-204ENST00000461438 CHIC1Q5VXU3 224 aa21.8■■□□□ 1.08
SFXN4-204ENST00000461438 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
SFXN4-204ENST00000461438 SENP3Q9H4L4 574 aaPredicted RBP18.74■□□□□ 0.59
SFXN4-204ENST00000461438 PLPPR3Q6T4P5 718 aa17.8■□□□□ 0.44
SFXN4-204ENST00000461438 FOXD1Q16676 465 aa17.33■□□□□ 0.36
SFXN4-204ENST00000461438 ADRA2BP18089 450 aa16.81■□□□□ 0.28
SFXN4-204ENST00000461438 PPP6R1Q9UPN7 881 aa16.81■□□□□ 0.28
SFXN4-204ENST00000461438 PIAS4Q8N2W9 510 aaPredicted RBP16.4■□□□□ 0.22
SFXN4-204ENST00000461438 NISCHQ9Y2I1 1504 aa16.13■□□□□ 0.17
SFXN4-204ENST00000461438 MSH5O43196 834 aa15.93■□□□□ 0.14
SFXN4-204ENST00000461438 PPP4R3CPQ6ZMV5 832 aa15.68■□□□□ 0.1
SFXN4-204ENST00000461438 KCNA4P22459 653 aa15.56■□□□□ 0.08
SFXN4-204ENST00000461438 SCAF1Q9H7N4 1312 aaKnown RBP15.41■□□□□ 0.06
SFXN4-204ENST00000461438 NCBP3Q53F19 620 aaKnown RBP15.35■□□□□ 0.05
SFXN4-204ENST00000461438 CNKSR2Q8WXI2 1034 aa15.22■□□□□ 0.03
SFXN4-204ENST00000461438 MAPK8IP2Q13387 824 aaPredicted RBP15.16■□□□□ 0.02
SFXN4-204ENST00000461438 NPM3O75607 178 aaKnown RBP15.12■□□□□ 0.01
SFXN4-204ENST00000461438 POTEDQ86YR6 584 aa15.07■□□□□ 0
SFXN4-204ENST00000461438 DMRT2Q9Y5R5 561 aa14.99□□□□□ -0.01
SFXN4-204ENST00000461438 SLC4A1APQ9BWU0 796 aaKnown RBP14.87□□□□□ -0.03
SFXN4-204ENST00000461438 RNF216Q9NWF9 866 aaPredicted RBP14.87□□□□□ -0.03
SFXN4-204ENST00000461438 HOXD11P31277 338 aaPredicted RBP14.77□□□□□ -0.05
SFXN4-204ENST00000461438 DNAJC5BQ9UF47 199 aa14.73□□□□□ -0.05
SFXN4-204ENST00000461438 EHMT2Q96KQ7 1210 aa14.66□□□□□ -0.06
SFXN4-204ENST00000461438 CSRNP3Q8WYN3 585 aa14.4□□□□□ -0.1
SFXN4-204ENST00000461438 ZBTB22O15209 634 aa14.33□□□□□ -0.12
SFXN4-204ENST00000461438 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
SFXN4-204ENST00000461438 DCAF8L1A6NGE4 600 aa14.26□□□□□ -0.13
SFXN4-204ENST00000461438 SLC4A2P04920 1241 aa14.22□□□□□ -0.13
SFXN4-204ENST00000461438 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.03□□□□□ -0.162e-6■■■■□ 20.4
SFXN4-204ENST00000461438 MYCNP04198 464 aaPredicted RBP13.99□□□□□ -0.17
SFXN4-204ENST00000461438 CCDC180Q9P1Z9 1646 aa13.95□□□□□ -0.18
SFXN4-204ENST00000461438 U3KPZ7 1027 aaPredicted RBP13.86□□□□□ -0.19
SFXN4-204ENST00000461438 ATXN8OSP0DMR3 200 aa13.79□□□□□ -0.2
SFXN4-204ENST00000461438 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.77□□□□□ -0.21
SFXN4-204ENST00000461438 HNRNPUL2Q1KMD3 747 aaKnown RBP13.77□□□□□ -0.21
SFXN4-204ENST00000461438 SAMD1Q6SPF0 538 aaPredicted RBP13.74□□□□□ -0.21
SFXN4-204ENST00000461438 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
SFXN4-204ENST00000461438 ZCCHC6Q5VYS8 1495 aaKnown RBP13.65□□□□□ -0.22
SFXN4-204ENST00000461438 APLP2Q06481 763 aa13.59□□□□□ -0.23
SFXN4-204ENST00000461438 ATF5Q9Y2D1 282 aaPredicted RBP13.55□□□□□ -0.24
SFXN4-204ENST00000461438 C1QBPQ07021 282 aaKnown RBP13.51□□□□□ -0.25
SFXN4-204ENST00000461438 DCAF1Q9Y4B6 1507 aa13.42□□□□□ -0.26
SFXN4-204ENST00000461438 SPINK5Q9NQ38 1064 aaPredicted RBP13.38□□□□□ -0.27
SFXN4-204ENST00000461438 ZNF219Q9P2Y4 722 aaPredicted RBP13.36□□□□□ -0.27
SFXN4-204ENST00000461438 CAPN15O75808 1086 aa13.31□□□□□ -0.28
SFXN4-204ENST00000461438 SHROOM4Q9ULL8 1493 aa13.29□□□□□ -0.28
SFXN4-204ENST00000461438 TRHP20396 242 aaPredicted RBP13.29□□□□□ -0.28
SFXN4-204ENST00000461438 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
SFXN4-204ENST00000461438 POLA2Q14181 598 aa13.12□□□□□ -0.31
SFXN4-204ENST00000461438 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
SFXN4-204ENST00000461438 ABCB7O75027 752 aa13.07□□□□□ -0.32
SFXN4-204ENST00000461438 DCAF8L2P0C7V8 631 aa13.06□□□□□ -0.32
SFXN4-204ENST00000461438 DSG3P32926 999 aa13.06□□□□□ -0.32
SFXN4-204ENST00000461438 FKBP8Q14318 412 aa13.01□□□□□ -0.33
SFXN4-204ENST00000461438 SUPT5HO00267 1087 aaKnown RBP13□□□□□ -0.33
SFXN4-204ENST00000461438 FBLN2P98095 1184 aa13□□□□□ -0.33
SFXN4-204ENST00000461438 MKRN4PQ13434 485 aaPredicted RBP13□□□□□ -0.33
SFXN4-204ENST00000461438 ZBTB12Q9Y330 459 aaPredicted RBP13□□□□□ -0.33
SFXN4-204ENST00000461438 NACADO15069 1562 aa12.9□□□□□ -0.35
SFXN4-204ENST00000461438 ABCC9O60706 1549 aa12.87□□□□□ -0.35
SFXN4-204ENST00000461438 SPDYE4A6NLX3 237 aa12.8□□□□□ -0.36
SFXN4-204ENST00000461438 SCRIBQ14160 1630 aa12.78□□□□□ -0.36
SFXN4-204ENST00000461438 OSCARQ8IYS5 282 aa12.71□□□□□ -0.37
SFXN4-204ENST00000461438 PROM2Q8N271 834 aa12.68□□□□□ -0.38
SFXN4-204ENST00000461438 RB1CC1Q8TDY2 1594 aa12.68□□□□□ -0.38
SFXN4-204ENST00000461438 SPDYE2BA6NHP3 402 aa12.65□□□□□ -0.38
SFXN4-204ENST00000461438 SPDYE6P0CI01 402 aa12.65□□□□□ -0.38
SFXN4-204ENST00000461438 SPDYE2Q495Y8 402 aa12.65□□□□□ -0.38
SFXN4-204ENST00000461438 RSF1Q96T23 1441 aaPredicted RBP12.64□□□□□ -0.39
SFXN4-204ENST00000461438 SSUH2Q9Y2M2 353 aa12.59□□□□□ -0.39
SFXN4-204ENST00000461438 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
SFXN4-204ENST00000461438 FBXO3Q9UK99 471 aa12.51□□□□□ -0.41
SFXN4-204ENST00000461438 RBM42Q9BTD8 480 aaKnown RBP12.48□□□□□ -0.41
SFXN4-204ENST00000461438 BAZ1AQ9NRL2 1556 aaPredicted RBP12.45□□□□□ -0.42
SFXN4-204ENST00000461438 MROH2BQ7Z745 1585 aa12.43□□□□□ -0.42
SFXN4-204ENST00000461438 CECR2Q9BXF3 1484 aa12.43□□□□□ -0.42
SFXN4-204ENST00000461438 PABPN1Q86U42 306 aaKnown RBP eCLIP12.43□□□□□ -0.42
SFXN4-204ENST00000461438 VASPP50552 380 aaPredicted RBP12.35□□□□□ -0.43
SFXN4-204ENST00000461438 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
SFXN4-204ENST00000461438 WIZO95785 1651 aa12.34□□□□□ -0.43
SFXN4-204ENST00000461438 UNC13AQ9UPW8 1703 aa12.34□□□□□ -0.43
SFXN4-204ENST00000461438 SMARCA4P51532 1647 aa12.32□□□□□ -0.44
SFXN4-204ENST00000461438 TOP2AP11388 1531 aaKnown RBP12.31□□□□□ -0.44
SFXN4-204ENST00000461438 STAG3Q9UJ98 1225 aa12.29□□□□□ -0.44
SFXN4-204ENST00000461438 AMER1Q5JTC6 1135 aaPredicted RBP12.27□□□□□ -0.45
SFXN4-204ENST00000461438 TRIM41Q8WV44 630 aa12.25□□□□□ -0.45
SFXN4-204ENST00000461438 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
SFXN4-204ENST00000461438 BICRAQ9NZM4 1560 aa12.23□□□□□ -0.45
SFXN4-204ENST00000461438 SPDYE1Q8NFV5 336 aaPredicted RBP12.22□□□□□ -0.45
SFXN4-204ENST00000461438 REM2Q8IYK8 340 aaPredicted RBP12.21□□□□□ -0.45
SFXN4-204ENST00000461438 RTN4Q9NQC3 1192 aaKnown RBP12.21□□□□□ -0.45
SFXN4-204ENST00000461438 PEG3Q9GZU2 1588 aa12.2□□□□□ -0.46
SFXN4-204ENST00000461438 SMARCA2P51531 1590 aa12.17□□□□□ -0.46
SFXN4-204ENST00000461438 IFNLR1Q8IU57 520 aaPredicted RBP12.16□□□□□ -0.46
SFXN4-204ENST00000461438 LOC105371045A0A1W2PR82 267 aa12.14□□□□□ -0.47
SFXN4-204ENST00000461438 CCDC88BA6NC98 1476 aa12.13□□□□□ -0.47
SFXN4-204ENST00000461438 PLCD3Q8N3E9 789 aa12.11□□□□□ -0.47
SFXN4-204ENST00000461438 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms