Protein–RNA interactions for Protein: Q6PIF2

SYCE2, Synaptonemal complex central element protein 2, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE2Q6PIF2 VPS11-206ENST00000614944 3388 ntTSL 2 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 ANO2-201ENST00000327087 3720 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 JAZF1-AS1-202ENST00000444500 3684 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AP000705.2-201ENST00000433524 1386 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 ZCCHC11-204ENST00000371544 5858 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 BTK-202ENST00000372880 2248 ntTSL 2 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 HSPD1P5-201ENST00000511127 1720 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 COLGALT2-203ENST00000367521 4723 ntTSL 2 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 INSL5-201ENST00000304526 715 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 SNORA30B-201ENST00000365319 129 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 C1QTNF9B-203ENST00000382145 888 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 PHBP1-201ENST00000392260 808 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AL008626.1-201ENST00000412357 775 ntTSL 2 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 PROX1-AS1-201ENST00000413560 496 ntTSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 EEF1A1P31-201ENST00000415978 1131 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 LINC02090-201ENST00000419151 400 ntTSL 3 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AC023141.1-201ENST00000419418 379 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 GAPDHP46-201ENST00000424043 994 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 SNX18P9-201ENST00000440580 835 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 MIR4435-2HG-211ENST00000443467 826 ntTSL 3 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 RPSAP76-201ENST00000444599 853 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 NUTF2P4-201ENST00000458353 381 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 B4GALT4-209ENST00000471675 712 ntTSL 3 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 PA2G4P4-201ENST00000473864 1182 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 RPL3P10-201ENST00000476002 1164 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AC106760.2-201ENST00000504159 619 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AC037450.1-201ENST00000518129 647 ntTSL 3 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AC107959.3-202ENST00000523806 450 ntTSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 LINC02318-202ENST00000556346 715 ntTSL 3 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 RPL23AP90-201ENST00000603820 236 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 TRBV10-3-201ENST00000611462 368 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 SMIM11B-201ENST00000612624 1021 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 ADAM2-202ENST00000347580 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 SLC16A12-201ENST00000371790 4617 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 TREML2-201ENST00000483722 3302 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 LRTOMT-203ENST00000324866 2402 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 BRDT-204ENST00000394530 3207 ntTSL 2 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 IQGAP1-214ENST00000560738 3602 ntTSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 PROM1-210ENST00000510224 4006 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 SGMS1-AS1-201ENST00000443374 12400 ntTSL 4 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 BCOR-203ENST00000378455 6338 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 AC008817.1-201ENST00000504215 1562 ntBASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 MTHFD1-201ENST00000216605 3136 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 XPO1-203ENST00000406957 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 TDRD9-201ENST00000339063 3447 ntTSL 5 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 BUB1B-201ENST00000287598 3725 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 LINC02210-213ENST00000591271 9678 ntTSL 3 BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 NEDD4L-214ENST00000586263 3347 ntAPPRIS ALT2 TSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
SYCE2Q6PIF2 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 HAUS2-201ENST00000260372 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 CLEC5A-207ENST00000551012 1420 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 HMSD-201ENST00000408945 2101 ntAPPRIS P1 TSL 3 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 ATP6V0D2-201ENST00000285393 2446 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 MMP3-201ENST00000299855 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 PDE6A-204ENST00000613228 5398 ntTSL 5 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 CTNND1-237ENST00000534579 6024 ntTSL 5 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AC104806.2-201ENST00000502400 1991 ntTSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 TTC9C-202ENST00000316461 1080 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 CRIP1P3-201ENST00000416794 220 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 CR391992.1-201ENST00000438601 394 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AC009970.1-201ENST00000444873 432 ntTSL 3 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 RPL10P6-201ENST00000457497 318 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AC009022.1-201ENST00000472115 496 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 RPL7P21-201ENST00000478287 635 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 RN7SL864P-201ENST00000493457 285 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 PAQR9-AS1-202ENST00000493825 576 ntTSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AC008799.1-201ENST00000495909 457 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AF186996.2-201ENST00000508347 907 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 EIF3KP1-201ENST00000513279 656 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 KRT18P54-201ENST00000513396 748 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 NTAN1P2-201ENST00000515730 940 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AP001994.1-201ENST00000527539 826 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 KCTD21-AS1-204ENST00000528468 554 ntTSL 4 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AC073896.2-201ENST00000549565 399 ntTSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 HIGD1AP9-201ENST00000550710 279 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AC009269.2-201ENST00000559892 474 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AC099524.1-206ENST00000568131 407 ntTSL 3 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 MED31-202ENST00000574128 619 ntTSL 3 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 RN7SL697P-201ENST00000582484 299 ntBASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 AL391425.1-201ENST00000613658 807 ntTSL 5 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 COX7C-203ENST00000509578 1584 ntAPPRIS P2 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 MPI-213ENST00000566377 2809 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 EMC1-202ENST00000375208 4084 ntTSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 ZNF546-207ENST00000600094 3426 ntAPPRIS ALT2 TSL 2 BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
SYCE2Q6PIF2 SPA17-204ENST00000532692 4949 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms