Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HLA-DRB4X5D2U9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 METTL26-203ENST00000397664 604 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 DUX4L16-201ENST00000555130 1264 ntBASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 FAM21FP-204ENST00000608637 956 ntBASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 MDK-213ENST00000617138 635 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 AC007225.1-201ENST00000566331 1836 ntBASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HLA-DRB4X5D2U9 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 ME2-216ENST00000639850 2331 ntTSL 5 BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HLA-DRB4X5D2U9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 AC231657.2-201ENST00000624556 255 ntBASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HLA-DRB4X5D2U9 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 FP700111.2-201ENST00000619190 1892 ntBASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 CNN2P6-201ENST00000439038 900 ntBASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 AL137784.2-201ENST00000607332 1000 ntBASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
HLA-DRB4X5D2U9 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DRB4X5D2U9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC15.18■□□□□ 0.02
HLA-DRB4X5D2U9 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
HLA-DRB4X5D2U9 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
HLA-DRB4X5D2U9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
HLA-DRB4X5D2U9 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms