Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PTCH2Q9Y6C5 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 LTBR-211ENST00000543190 785 ntTSL 3 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PTCH2Q9Y6C5 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.27
PTCH2Q9Y6C5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 GUK1-204ENST00000366721 689 ntTSL 3 BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 TOLLIP-AS1-201ENST00000530897 939 ntBASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 CLN6-221ENST00000637494 765 ntTSL 5 BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PTCH2Q9Y6C5 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 CR392000.1-201ENST00000624770 1228 ntBASIC23■■□□□ 1.27
PTCH2Q9Y6C5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC23■■□□□ 1.27
PTCH2Q9Y6C5 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 LIN28AP1-201ENST00000429574 405 ntBASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 KRT126P-201ENST00000549467 1181 ntBASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 AC004264.1-201ENST00000608354 794 ntBASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 AC091076.1-201ENST00000610741 619 ntBASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC22.99■■□□□ 1.27
PTCH2Q9Y6C5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 ATP5G1P1-201ENST00000448724 379 ntBASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
PTCH2Q9Y6C5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 KRT18P56-201ENST00000507275 550 ntBASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 PNN-205ENST00000556530 601 ntTSL 2 BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 LGALS8-AS1-201ENST00000487567 1457 ntBASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.97■■□□□ 1.27
PTCH2Q9Y6C5 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms