Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 PCDHAC2-203ENST00000615316 3011 ntBASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 AC116050.2-201ENST00000612102 1779 ntBASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
PCDHGB3Q9Y5G1 AFG3L1P-217ENST00000557444 2447 ntBASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 AL162377.1-201ENST00000618844 1793 ntBASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
PCDHGB3Q9Y5G1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 AC231657.2-201ENST00000624556 255 ntBASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
PCDHGB3Q9Y5G1 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
PCDHGB3Q9Y5G1 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 FP700111.2-201ENST00000619190 1892 ntBASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 PTPA-214ENST00000423100 988 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 MFSD11-216ENST00000590393 1141 ntBASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
PCDHGB3Q9Y5G1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms