Protein–RNA interactions for Protein: Q9Y446

PKP3, Plakophilin-3, humanhuman

Predictions only

Length 797 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3Q9Y446 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC20.33■□□□□ 0.84
PKP3Q9Y446 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PKP3Q9Y446 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
PKP3Q9Y446 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PKP3Q9Y446 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
PKP3Q9Y446 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
PKP3Q9Y446 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.84
PKP3Q9Y446 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 SLC29A4P1-201ENST00000398760 971 ntBASIC20.32■□□□□ 0.84
PKP3Q9Y446 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.32■□□□□ 0.84
PKP3Q9Y446 AC105020.6-201ENST00000621523 1217 ntBASIC20.32■□□□□ 0.84
PKP3Q9Y446 AC073314.1-201ENST00000568729 2216 ntBASIC20.32■□□□□ 0.84
PKP3Q9Y446 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.32■□□□□ 0.84
PKP3Q9Y446 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
PKP3Q9Y446 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PKP3Q9Y446 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
PKP3Q9Y446 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.31■□□□□ 0.84
PKP3Q9Y446 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PKP3Q9Y446 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.31■□□□□ 0.84
PKP3Q9Y446 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
PKP3Q9Y446 LSM12P1-201ENST00000411836 588 ntBASIC20.31■□□□□ 0.84
PKP3Q9Y446 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PKP3Q9Y446 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PKP3Q9Y446 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
PKP3Q9Y446 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PKP3Q9Y446 AC020907.5-201ENST00000624372 1936 ntBASIC20.31■□□□□ 0.84
PKP3Q9Y446 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PKP3Q9Y446 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
PKP3Q9Y446 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
PKP3Q9Y446 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
PKP3Q9Y446 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
PKP3Q9Y446 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 AP005212.1-201ENST00000581547 1997 ntBASIC20.3■□□□□ 0.84
PKP3Q9Y446 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.3■□□□□ 0.84
PKP3Q9Y446 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC20.3■□□□□ 0.84
PKP3Q9Y446 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.3■□□□□ 0.84
PKP3Q9Y446 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.3■□□□□ 0.84
PKP3Q9Y446 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC20.3■□□□□ 0.84
PKP3Q9Y446 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
PKP3Q9Y446 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.3■□□□□ 0.84
PKP3Q9Y446 AL157384.1-201ENST00000445995 2473 ntBASIC20.3■□□□□ 0.84
PKP3Q9Y446 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
PKP3Q9Y446 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PKP3Q9Y446 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 BX276092.2-201ENST00000417668 665 ntBASIC20.29■□□□□ 0.84
PKP3Q9Y446 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.29■□□□□ 0.84
PKP3Q9Y446 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PKP3Q9Y446 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PKP3Q9Y446 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
PKP3Q9Y446 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.28■□□□□ 0.84
PKP3Q9Y446 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 GABARAPL3-202ENST00000624044 1851 ntBASIC20.28■□□□□ 0.84
PKP3Q9Y446 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PKP3Q9Y446 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms