Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 RBM17P2-201ENST00000616397 1405 ntBASIC18.91■□□□□ 0.62
IFT52Q9Y366 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 MIR2861-201ENST00000636310 90 ntBASIC18.91■□□□□ 0.62
IFT52Q9Y366 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
IFT52Q9Y366 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.91■□□□□ 0.62
IFT52Q9Y366 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 AC091799.1-201ENST00000422823 811 ntBASIC18.9■□□□□ 0.62
IFT52Q9Y366 AC007322.3-201ENST00000426526 701 ntBASIC18.9■□□□□ 0.62
IFT52Q9Y366 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 AC019069.1-201ENST00000610008 1333 ntBASIC18.9■□□□□ 0.62
IFT52Q9Y366 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
IFT52Q9Y366 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.9■□□□□ 0.62
IFT52Q9Y366 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
IFT52Q9Y366 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
IFT52Q9Y366 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.89■□□□□ 0.61
IFT52Q9Y366 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
IFT52Q9Y366 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.89■□□□□ 0.61
IFT52Q9Y366 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IFT52Q9Y366 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
IFT52Q9Y366 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC18.89■□□□□ 0.61
IFT52Q9Y366 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
IFT52Q9Y366 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IFT52Q9Y366 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 AL162377.1-201ENST00000618844 1793 ntBASIC18.88■□□□□ 0.61
IFT52Q9Y366 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
IFT52Q9Y366 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IFT52Q9Y366 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms