Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 LIN28AP1-201ENST00000429574 405 ntBASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC24.7■■□□□ 1.54
ZC3H4Q9UPT8 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 KRT18P56-201ENST00000507275 550 ntBASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 AC022616.7-201ENST00000525383 220 ntBASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC24.69■■□□□ 1.54
ZC3H4Q9UPT8 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 AC027702.1-201ENST00000563810 1770 ntBASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 GCA-201ENST00000233612 1694 ntTSL 2 BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ZC3H4Q9UPT8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 KSR1P1-201ENST00000446298 240 ntBASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 AL121906.2-201ENST00000621597 723 ntBASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ZC3H4Q9UPT8 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 ATP5G1P1-201ENST00000448724 379 ntBASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 AC063952.2-201ENST00000498792 1227 ntBASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.66■■□□□ 1.54
ZC3H4Q9UPT8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 MYC-208ENST00000641036 567 ntBASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
ZC3H4Q9UPT8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms