Protein–RNA interactions for Protein: Q9UNH7

SNX6, Sorting nexin-6, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6Q9UNH7 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX6Q9UNH7 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SNX6Q9UNH7 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SNX6Q9UNH7 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX6Q9UNH7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.59■□□□□ 0.73
SNX6Q9UNH7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX6Q9UNH7 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SNX6Q9UNH7 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
SNX6Q9UNH7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 AC137761.2-201ENST00000561729 223 ntBASIC19.58■□□□□ 0.72
SNX6Q9UNH7 AC145350.3-201ENST00000569033 163 ntBASIC19.58■□□□□ 0.72
SNX6Q9UNH7 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
SNX6Q9UNH7 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.57■□□□□ 0.72
SNX6Q9UNH7 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 AL162412.1-201ENST00000567129 965 ntBASIC19.57■□□□□ 0.72
SNX6Q9UNH7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 AC013268.1-206ENST00000638368 961 ntBASIC19.57■□□□□ 0.72
SNX6Q9UNH7 AC112229.1-201ENST00000639295 961 ntBASIC19.57■□□□□ 0.72
SNX6Q9UNH7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.57■□□□□ 0.72
SNX6Q9UNH7 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
SNX6Q9UNH7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 KRT18P5-201ENST00000436075 1291 ntBASIC19.55■□□□□ 0.72
SNX6Q9UNH7 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 AC007322.4-201ENST00000509611 723 ntBASIC19.55■□□□□ 0.72
SNX6Q9UNH7 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 SMG8-203ENST00000578922 2178 ntBASIC19.55■□□□□ 0.72
SNX6Q9UNH7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
SNX6Q9UNH7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms