Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
PCDHA4Q9UN74 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHA4Q9UN74 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC23.2■■□□□ 1.3
PCDHA4Q9UN74 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
PCDHA4Q9UN74 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHA4Q9UN74 AC091874.3-201ENST00000512672 1195 ntBASIC23.2■■□□□ 1.3
PCDHA4Q9UN74 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC23.2■■□□□ 1.3
PCDHA4Q9UN74 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
PCDHA4Q9UN74 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC23.2■■□□□ 1.3
PCDHA4Q9UN74 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 AC073210.2-201ENST00000430369 194 ntBASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 BRWD1-AS2-201ENST00000603064 1028 ntBASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 DPP3P2-201ENST00000416030 1696 ntBASIC23.19■■□□□ 1.3
PCDHA4Q9UN74 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 AL355802.2-201ENST00000402069 882 ntBASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 LINC01521-201ENST00000504184 1943 ntBASIC23.18■■□□□ 1.3
PCDHA4Q9UN74 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 AC069152.1-201ENST00000438030 544 ntBASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 BET1L-207ENST00000529614 560 ntTSL 5 BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 MYC-209ENST00000641252 345 ntBASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
PCDHA4Q9UN74 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 AL512408.1-201ENST00000569378 2000 ntBASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 NME6-213ENST00000451657 871 ntTSL 2 BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 AC133041.1-202ENST00000642053 222 ntBASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 H19-201ENST00000411754 1788 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
PCDHA4Q9UN74 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 AL162377.1-201ENST00000618844 1793 ntBASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 RHEB-204ENST00000472642 900 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 EMC9-206ENST00000560403 872 ntTSL 2 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 SMG8-203ENST00000578922 2178 ntBASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
PCDHA4Q9UN74 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms