Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 SERP1-205ENST00000487153 657 ntTSL 4 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
NOTCH3Q9UM47 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 HES2-205ENST00000487437 968 ntTSL 3 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 AP001412.1-201ENST00000608405 714 ntBASIC15.59■□□□□ 0.09
NOTCH3Q9UM47 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.58■□□□□ 0.09
NOTCH3Q9UM47 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
NOTCH3Q9UM47 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.09
NOTCH3Q9UM47 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
NOTCH3Q9UM47 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.58■□□□□ 0.09
NOTCH3Q9UM47 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
NOTCH3Q9UM47 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 AL355075.4-201ENST00000554988 638 ntBASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 AC233702.5-201ENST00000584107 538 ntBASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 AL023875.1-201ENST00000640777 796 ntBASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
NOTCH3Q9UM47 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms