Protein–RNA interactions for Protein: Q9UJ41

RABGEF1, Rab5 GDP/GTP exchange factor, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RABGEF1Q9UJ41 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 MYCNOS-205ENST00000641950 531 ntBASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RABGEF1Q9UJ41 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.75■□□□□ 0.91
RABGEF1Q9UJ41 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 AC231657.2-201ENST00000624556 255 ntBASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC20.74■□□□□ 0.91
RABGEF1Q9UJ41 AC092720.2-201ENST00000602388 1665 ntBASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 AC007322.1-201ENST00000426983 750 ntBASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RABGEF1Q9UJ41 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 AC010141.2-201ENST00000452426 721 ntBASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 AC083906.2-201ENST00000511578 360 ntBASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 AC005181.1-201ENST00000604782 1256 ntBASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 AL121832.2-201ENST00000610979 668 ntBASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
RABGEF1Q9UJ41 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RABGEF1Q9UJ41 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms