Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 MTDHP1-201ENST00000605323 784 ntBASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LRIT1Q9P2V4 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRIT1Q9P2V4 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRIT1Q9P2V4 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LRIT1Q9P2V4 AL024507.2-201ENST00000606070 2574 ntBASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LRIT1Q9P2V4 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 AL023875.1-201ENST00000640777 796 ntBASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LRIT1Q9P2V4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 AL049796.1-201ENST00000565336 1766 ntBASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 Z99916.2-201ENST00000604037 246 ntBASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 MIR2861-201ENST00000636310 90 ntBASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 AC121338.2-201ENST00000622535 1744 ntBASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LRIT1Q9P2V4 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
LRIT1Q9P2V4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.6■□□□□ 0.73
LRIT1Q9P2V4 KRT8P36-201ENST00000489121 1440 ntBASIC19.6■□□□□ 0.73
LRIT1Q9P2V4 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms