Protein–RNA interactions for Protein: Q9NYA1

SPHK1, Sphingosine kinase 1, humanhuman

Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1Q9NYA1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SPHK1Q9NYA1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 TSPY20P-201ENST00000450910 630 ntBASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 AC060766.5-201ENST00000590539 871 ntBASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SPHK1Q9NYA1 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.52■□□□□ 0.71
SPHK1Q9NYA1 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SPHK1Q9NYA1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC19.52■□□□□ 0.71
SPHK1Q9NYA1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
SPHK1Q9NYA1 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 PKD1P6-201ENST00000343738 4769 ntBASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 AC092368.3-202ENST00000574180 1591 ntBASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
SPHK1Q9NYA1 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 PNMA6B-201ENST00000538162 1200 ntBASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SPHK1Q9NYA1 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 SLC29A4P2-201ENST00000504749 1089 ntBASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 UNC93B5-201ENST00000530315 699 ntBASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SPHK1Q9NYA1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms