Protein–RNA interactions for Protein: Q9NWY4

HPF1, Histone PARylation factor 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPF1Q9NWY4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 MIR4651-201ENST00000582622 73 ntBASIC18.78■□□□□ 0.6
HPF1Q9NWY4 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.78■□□□□ 0.6
HPF1Q9NWY4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 AC121338.2-201ENST00000622535 1744 ntBASIC18.77■□□□□ 0.6
HPF1Q9NWY4 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 AL356652.1-201ENST00000615962 565 ntBASIC18.77■□□□□ 0.6
HPF1Q9NWY4 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC18.77■□□□□ 0.6
HPF1Q9NWY4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HPF1Q9NWY4 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.77■□□□□ 0.59
HPF1Q9NWY4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
HPF1Q9NWY4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HPF1Q9NWY4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.75■□□□□ 0.59
HPF1Q9NWY4 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 HLA-B-256ENST00000639848 1089 ntBASIC18.74■□□□□ 0.59
HPF1Q9NWY4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC18.74■□□□□ 0.59
HPF1Q9NWY4 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPF1Q9NWY4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPF1Q9NWY4 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.73■□□□□ 0.59
HPF1Q9NWY4 AL137060.1-201ENST00000618151 2648 ntBASIC18.73■□□□□ 0.59
HPF1Q9NWY4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPF1Q9NWY4 AL391422.3-201ENST00000603791 2761 ntBASIC18.73■□□□□ 0.59
HPF1Q9NWY4 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
HPF1Q9NWY4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HPF1Q9NWY4 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
HPF1Q9NWY4 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms