Protein–RNA interactions for Protein: Q9NVW2

RLIM, E3 ubiquitin-protein ligase RLIM, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RLIMQ9NVW2 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 AC243732.1-201ENST00000612648 864 ntBASIC18.85■□□□□ 0.61
RLIMQ9NVW2 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 AC087289.5-201ENST00000586076 3175 ntBASIC18.85■□□□□ 0.61
RLIMQ9NVW2 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RLIMQ9NVW2 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 TCF3P1-201ENST00000423021 1937 ntBASIC18.84■□□□□ 0.61
RLIMQ9NVW2 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RLIMQ9NVW2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RLIMQ9NVW2 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RLIMQ9NVW2 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC18.83■□□□□ 0.61
RLIMQ9NVW2 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RLIMQ9NVW2 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
RLIMQ9NVW2 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 MYCNOS-205ENST00000641950 531 ntBASIC18.83■□□□□ 0.6
RLIMQ9NVW2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RLIMQ9NVW2 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 MIR2861-201ENST00000636310 90 ntBASIC18.82■□□□□ 0.6
RLIMQ9NVW2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 AC092720.2-201ENST00000602388 1665 ntBASIC18.82■□□□□ 0.6
RLIMQ9NVW2 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
RLIMQ9NVW2 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RLIMQ9NVW2 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 74.9 ms