Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 WT1-AS_3.1-201ENST00000613262 234 ntBASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 AC099778.1-201ENST00000568593 1911 ntBASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC22.61■■□□□ 1.21
BLOC1S4Q9NUP1 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 AL391422.3-201ENST00000603791 2761 ntBASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 AC090192.1-201ENST00000517740 490 ntBASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 USP39-204ENST00000409766 2033 ntTSL 2 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
BLOC1S4Q9NUP1 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
BLOC1S4Q9NUP1 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 PTBP1P-201ENST00000554374 1601 ntBASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC22.58■■□□□ 1.21
BLOC1S4Q9NUP1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
BLOC1S4Q9NUP1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.58■■□□□ 1.2
BLOC1S4Q9NUP1 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC22.58■■□□□ 1.2
BLOC1S4Q9NUP1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 TSPY6P-201ENST00000448518 926 ntBASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 AL589743.5-201ENST00000616611 1050 ntBASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
BLOC1S4Q9NUP1 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 MIPEPP3-201ENST00000412105 444 ntBASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 BX276092.2-201ENST00000417668 665 ntBASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 GXYLT1P5-201ENST00000614548 1189 ntBASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 AC112907.3-201ENST00000577781 2400 ntBASIC22.56■■□□□ 1.2
BLOC1S4Q9NUP1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC22.55■■□□□ 1.2
BLOC1S4Q9NUP1 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms