Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 IGHV3-19-201ENST00000521488 291 ntBASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 AL354811.1-201ENST00000610286 706 ntBASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
CCM2LQ9NUG4 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.22■□□□□ 0.67
CCM2LQ9NUG4 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCM2LQ9NUG4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCM2LQ9NUG4 AC055733.4-201ENST00000638462 1354 ntBASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCM2LQ9NUG4 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 AC009237.3-201ENST00000393279 1427 ntBASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCM2LQ9NUG4 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms