Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TREX1Q9NSU2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 AC007322.1-201ENST00000426983 750 ntBASIC20.25■□□□□ 0.83
TREX1Q9NSU2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TREX1Q9NSU2 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 PCDHAC2-203ENST00000615316 3011 ntBASIC20.24■□□□□ 0.83
TREX1Q9NSU2 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.24■□□□□ 0.83
TREX1Q9NSU2 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 AC004911.1-201ENST00000416316 871 ntBASIC20.23■□□□□ 0.83
TREX1Q9NSU2 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 AC069236.1-201ENST00000604339 616 ntBASIC20.23■□□□□ 0.83
TREX1Q9NSU2 IKBKGP1-201ENST00000612193 1073 ntBASIC20.23■□□□□ 0.83
TREX1Q9NSU2 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC20.23■□□□□ 0.83
TREX1Q9NSU2 GCK-205ENST00000437084 1385 ntTSL 5 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.22■□□□□ 0.83
TREX1Q9NSU2 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TREX1Q9NSU2 KRT18P68-201ENST00000392293 1000 ntBASIC20.21■□□□□ 0.83
TREX1Q9NSU2 MIR935-201ENST00000401179 91 ntBASIC20.21■□□□□ 0.83
TREX1Q9NSU2 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms