Protein–RNA interactions for Protein: Q9NQ40

SLC52A3, Solute carrier family 52, riboflavin transporter, member 3, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A3Q9NQ40 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SLC52A3Q9NQ40 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
SLC52A3Q9NQ40 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 AC093484.2-201ENST00000580996 2166 ntBASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 SLC7A5P1-201ENST00000568957 537 ntBASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
SLC52A3Q9NQ40 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 AP000974.1-201ENST00000623909 2387 ntBASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 AC007322.3-201ENST00000426526 701 ntBASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SLC52A3Q9NQ40 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 LINC02228-203ENST00000641970 1355 ntBASIC19.18■□□□□ 0.66
SLC52A3Q9NQ40 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SLC52A3Q9NQ40 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 TERF1P2-201ENST00000583350 1212 ntBASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.16■□□□□ 0.66
SLC52A3Q9NQ40 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms