Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD248Q9HCU0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD248Q9HCU0 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD248Q9HCU0 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
CD248Q9HCU0 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.19■□□□□ 0.98
CD248Q9HCU0 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
CD248Q9HCU0 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.18■□□□□ 0.98
CD248Q9HCU0 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.18■□□□□ 0.98
CD248Q9HCU0 AC091874.3-201ENST00000512672 1195 ntBASIC21.18■□□□□ 0.98
CD248Q9HCU0 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.18■□□□□ 0.98
CD248Q9HCU0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
CD248Q9HCU0 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC21.18■□□□□ 0.98
CD248Q9HCU0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
CD248Q9HCU0 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC21.18■□□□□ 0.98
CD248Q9HCU0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD248Q9HCU0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 AFG3L1P-217ENST00000557444 2447 ntBASIC21.17■□□□□ 0.98
CD248Q9HCU0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 PRORSD1P-201ENST00000295112 541 ntBASIC21.17■□□□□ 0.98
CD248Q9HCU0 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
CD248Q9HCU0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
CD248Q9HCU0 AC026471.6-201ENST00000622954 1905 ntBASIC21.17■□□□□ 0.98
CD248Q9HCU0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
CD248Q9HCU0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
CD248Q9HCU0 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.16■□□□□ 0.98
CD248Q9HCU0 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.16■□□□□ 0.98
CD248Q9HCU0 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC21.16■□□□□ 0.98
CD248Q9HCU0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
CD248Q9HCU0 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.16■□□□□ 0.98
CD248Q9HCU0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC21.16■□□□□ 0.98
CD248Q9HCU0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CD248Q9HCU0 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.15■□□□□ 0.98
CD248Q9HCU0 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD248Q9HCU0 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.15■□□□□ 0.98
CD248Q9HCU0 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC21.15■□□□□ 0.98
CD248Q9HCU0 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
CD248Q9HCU0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD248Q9HCU0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD248Q9HCU0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC21.15■□□□□ 0.98
CD248Q9HCU0 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.15■□□□□ 0.98
CD248Q9HCU0 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CD248Q9HCU0 AC244015.2-201ENST00000616358 1861 ntBASIC21.15■□□□□ 0.98
CD248Q9HCU0 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD248Q9HCU0 AC026471.1-201ENST00000564629 3026 ntBASIC21.15■□□□□ 0.98
CD248Q9HCU0 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD248Q9HCU0 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CD248Q9HCU0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CD248Q9HCU0 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CD248Q9HCU0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
CD248Q9HCU0 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CD248Q9HCU0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.14■□□□□ 0.97
CD248Q9HCU0 AC091799.1-201ENST00000422823 811 ntBASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms