Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CSNK1G1Q9HCP0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 SOX15-203ENST00000570788 1093 ntBASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 KLF2-202ENST00000592003 564 ntTSL 3 BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CSNK1G1Q9HCP0 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 ITM2C-210ENST00000620962 501 ntBASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 AC092720.2-201ENST00000602388 1665 ntBASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.24■□□□□ 0.99
CSNK1G1Q9HCP0 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 H19-201ENST00000411754 1788 ntTSL 5 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
CSNK1G1Q9HCP0 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 TMEM191A-211ENST00000637163 1067 ntBASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
CSNK1G1Q9HCP0 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 AC008687.6-201ENST00000596318 630 ntBASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
CSNK1G1Q9HCP0 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC21.2■□□□□ 0.99
CSNK1G1Q9HCP0 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms