Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.29■□□□□ 0.68
PIF1Q9H611 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.28■□□□□ 0.68
PIF1Q9H611 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.28■□□□□ 0.68
PIF1Q9H611 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC19.28■□□□□ 0.68
PIF1Q9H611 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC19.28■□□□□ 0.68
PIF1Q9H611 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
PIF1Q9H611 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
PIF1Q9H611 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.27■□□□□ 0.68
PIF1Q9H611 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.27■□□□□ 0.68
PIF1Q9H611 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIF1Q9H611 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
PIF1Q9H611 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.27■□□□□ 0.68
PIF1Q9H611 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIF1Q9H611 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
PIF1Q9H611 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.27■□□□□ 0.68
PIF1Q9H611 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC19.27■□□□□ 0.68
PIF1Q9H611 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIF1Q9H611 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC19.27■□□□□ 0.68
PIF1Q9H611 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.27■□□□□ 0.68
PIF1Q9H611 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
PIF1Q9H611 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIF1Q9H611 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
PIF1Q9H611 AC125437.2-201ENST00000625180 2167 ntBASIC19.27■□□□□ 0.68
PIF1Q9H611 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.27■□□□□ 0.68
PIF1Q9H611 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PIF1Q9H611 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PIF1Q9H611 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
PIF1Q9H611 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
PIF1Q9H611 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.26■□□□□ 0.67
PIF1Q9H611 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC19.26■□□□□ 0.67
PIF1Q9H611 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.26■□□□□ 0.67
PIF1Q9H611 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
PIF1Q9H611 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.26■□□□□ 0.67
PIF1Q9H611 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.26■□□□□ 0.67
PIF1Q9H611 AC120498.9-201ENST00000339021 3867 ntBASIC19.26■□□□□ 0.67
PIF1Q9H611 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 AC008175.2-201ENST00000612840 297 ntBASIC19.26■□□□□ 0.67
PIF1Q9H611 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
PIF1Q9H611 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PIF1Q9H611 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC19.25■□□□□ 0.67
PIF1Q9H611 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PIF1Q9H611 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
PIF1Q9H611 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC19.25■□□□□ 0.67
PIF1Q9H611 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.25■□□□□ 0.67
PIF1Q9H611 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PIF1Q9H611 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 IRS3P-201ENST00000223076 1006 ntBASIC19.25■□□□□ 0.67
PIF1Q9H611 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC19.25■□□□□ 0.67
PIF1Q9H611 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.25■□□□□ 0.67
PIF1Q9H611 AC105265.2-201ENST00000467189 838 ntBASIC19.25■□□□□ 0.67
PIF1Q9H611 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PIF1Q9H611 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.25■□□□□ 0.67
PIF1Q9H611 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.25■□□□□ 0.67
PIF1Q9H611 AL358852.1-201ENST00000623174 1268 ntBASIC19.25■□□□□ 0.67
PIF1Q9H611 RARRES2P11-201ENST00000635158 484 ntBASIC19.25■□□□□ 0.67
PIF1Q9H611 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
PIF1Q9H611 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
PIF1Q9H611 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.25■□□□□ 0.67
PIF1Q9H611 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PIF1Q9H611 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
PIF1Q9H611 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC19.25■□□□□ 0.67
PIF1Q9H611 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.24■□□□□ 0.67
PIF1Q9H611 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PIF1Q9H611 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PIF1Q9H611 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms