Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 NT5C3AP1-201ENST00000394500 1012 ntBASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 AC096631.2-201ENST00000436136 790 ntBASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 AC079140.4-201ENST00000507448 529 ntBASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDC42EP4Q9H3Q1 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 TMEM179-206ENST00000616017 1645 ntBASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 EDA-201ENST00000338901 1233 ntBASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 MIR939-201ENST00000401314 82 ntBASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 AC106739.1-201ENST00000617035 715 ntBASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDC42EP4Q9H3Q1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 AF213884.3-201ENST00000563833 479 ntBASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 AC005332.7-201ENST00000614046 2005 ntBASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDC42EP4Q9H3Q1 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CDC42EP4Q9H3Q1 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42EP4Q9H3Q1 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42EP4Q9H3Q1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
CDC42EP4Q9H3Q1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42EP4Q9H3Q1 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42EP4Q9H3Q1 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CDC42EP4Q9H3Q1 AL354811.1-201ENST00000610286 706 ntBASIC20.58■□□□□ 0.89
CDC42EP4Q9H3Q1 KRT8P36-201ENST00000489121 1440 ntBASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 BX119927.1-201ENST00000636596 1552 ntBASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CDC42EP4Q9H3Q1 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDC42EP4Q9H3Q1 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms