Protein–RNA interactions for Protein: Q9H347

UBQLN3, Ubiquilin-3, humanhuman

Predictions only

Length 655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN3Q9H347 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.76■□□□□ 0.59
UBQLN3Q9H347 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN3Q9H347 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.76■□□□□ 0.59
UBQLN3Q9H347 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN3Q9H347 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
UBQLN3Q9H347 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
UBQLN3Q9H347 AC116050.2-201ENST00000612102 1779 ntBASIC18.76■□□□□ 0.59
UBQLN3Q9H347 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 MIR4758-201ENST00000577688 71 ntBASIC18.75■□□□□ 0.59
UBQLN3Q9H347 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 AC133041.1-202ENST00000642053 222 ntBASIC18.75■□□□□ 0.59
UBQLN3Q9H347 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.75■□□□□ 0.59
UBQLN3Q9H347 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
UBQLN3Q9H347 AC020907.5-201ENST00000624372 1936 ntBASIC18.74■□□□□ 0.59
UBQLN3Q9H347 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 AC098934.4-201ENST00000564127 592 ntBASIC18.74■□□□□ 0.59
UBQLN3Q9H347 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC18.74■□□□□ 0.59
UBQLN3Q9H347 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 BX276092.2-201ENST00000417668 665 ntBASIC18.73■□□□□ 0.59
UBQLN3Q9H347 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.73■□□□□ 0.59
UBQLN3Q9H347 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.72■□□□□ 0.59
UBQLN3Q9H347 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
UBQLN3Q9H347 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms