Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
VPS11Q9H270 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC20.34■□□□□ 0.85
VPS11Q9H270 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
VPS11Q9H270 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.34■□□□□ 0.85
VPS11Q9H270 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.34■□□□□ 0.85
VPS11Q9H270 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.34■□□□□ 0.85
VPS11Q9H270 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.34■□□□□ 0.85
VPS11Q9H270 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
VPS11Q9H270 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
VPS11Q9H270 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.34■□□□□ 0.85
VPS11Q9H270 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
VPS11Q9H270 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VPS11Q9H270 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
VPS11Q9H270 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
VPS11Q9H270 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS11Q9H270 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
VPS11Q9H270 AIRN-201ENST00000601203 4374 ntBASIC20.33■□□□□ 0.85
VPS11Q9H270 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.33■□□□□ 0.85
VPS11Q9H270 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.33■□□□□ 0.85
VPS11Q9H270 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
VPS11Q9H270 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.33■□□□□ 0.85
VPS11Q9H270 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
VPS11Q9H270 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.33■□□□□ 0.84
VPS11Q9H270 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
VPS11Q9H270 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 AC125437.2-201ENST00000625180 2167 ntBASIC20.32■□□□□ 0.84
VPS11Q9H270 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS11Q9H270 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VPS11Q9H270 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
VPS11Q9H270 IRS3P-201ENST00000223076 1006 ntBASIC20.32■□□□□ 0.84
VPS11Q9H270 AC010141.2-201ENST00000452426 721 ntBASIC20.32■□□□□ 0.84
VPS11Q9H270 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.32■□□□□ 0.84
VPS11Q9H270 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
VPS11Q9H270 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
VPS11Q9H270 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VPS11Q9H270 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC20.32■□□□□ 0.84
VPS11Q9H270 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
VPS11Q9H270 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS11Q9H270 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS11Q9H270 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.31■□□□□ 0.84
VPS11Q9H270 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
VPS11Q9H270 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VPS11Q9H270 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.31■□□□□ 0.84
VPS11Q9H270 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.31■□□□□ 0.84
VPS11Q9H270 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS11Q9H270 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS11Q9H270 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS11Q9H270 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
VPS11Q9H270 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VPS11Q9H270 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VPS11Q9H270 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.3■□□□□ 0.84
VPS11Q9H270 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
VPS11Q9H270 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
VPS11Q9H270 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.3■□□□□ 0.84
VPS11Q9H270 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.3■□□□□ 0.84
VPS11Q9H270 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.3■□□□□ 0.84
VPS11Q9H270 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.3■□□□□ 0.84
VPS11Q9H270 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
VPS11Q9H270 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.3■□□□□ 0.84
VPS11Q9H270 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
VPS11Q9H270 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.3■□□□□ 0.84
VPS11Q9H270 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
VPS11Q9H270 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 AC116050.2-201ENST00000612102 1779 ntBASIC20.29■□□□□ 0.84
VPS11Q9H270 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
VPS11Q9H270 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC20.29■□□□□ 0.84
VPS11Q9H270 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
VPS11Q9H270 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VPS11Q9H270 AC105265.2-201ENST00000467189 838 ntBASIC20.29■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms