Protein–RNA interactions for Protein: Q9H251

CDH23, Cadherin-23, humanhuman

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23Q9H251 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH23Q9H251 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.72■■□□□ 1.07
CDH23Q9H251 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH23Q9H251 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH23Q9H251 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
CDH23Q9H251 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
CDH23Q9H251 ECEL1P2-202ENST00000465689 757 ntBASIC21.72■■□□□ 1.07
CDH23Q9H251 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH23Q9H251 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
CDH23Q9H251 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC21.72■■□□□ 1.07
CDH23Q9H251 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC21.72■■□□□ 1.07
CDH23Q9H251 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH23Q9H251 MED25-212ENST00000618715 1467 ntTSL 5 BASIC21.71■■□□□ 1.07
CDH23Q9H251 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
CDH23Q9H251 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC21.71■■□□□ 1.07
CDH23Q9H251 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.71■■□□□ 1.07
CDH23Q9H251 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH23Q9H251 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH23Q9H251 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
CDH23Q9H251 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH23Q9H251 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH23Q9H251 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH23Q9H251 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH23Q9H251 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC21.71■■□□□ 1.07
CDH23Q9H251 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
CDH23Q9H251 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
CDH23Q9H251 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
CDH23Q9H251 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
CDH23Q9H251 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
CDH23Q9H251 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH23Q9H251 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH23Q9H251 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH23Q9H251 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.7■■□□□ 1.06
CDH23Q9H251 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 AC116562.2-201ENST00000507042 360 ntBASIC21.7■■□□□ 1.06
CDH23Q9H251 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC21.7■■□□□ 1.06
CDH23Q9H251 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.7■■□□□ 1.06
CDH23Q9H251 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
CDH23Q9H251 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 INGX-201ENST00000359239 846 ntBASIC21.7■■□□□ 1.06
CDH23Q9H251 RER1-204ENST00000378518 522 ntTSL 3 BASIC21.7■■□□□ 1.06
CDH23Q9H251 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
CDH23Q9H251 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH23Q9H251 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH23Q9H251 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH23Q9H251 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH23Q9H251 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH23Q9H251 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH23Q9H251 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH23Q9H251 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
CDH23Q9H251 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CDH23Q9H251 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
CDH23Q9H251 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.69■■□□□ 1.06
CDH23Q9H251 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH23Q9H251 AC073195.1-201ENST00000607241 877 ntBASIC21.69■■□□□ 1.06
CDH23Q9H251 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CDH23Q9H251 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.69■■□□□ 1.06
CDH23Q9H251 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC21.69■■□□□ 1.06
CDH23Q9H251 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH23Q9H251 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH23Q9H251 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CDH23Q9H251 AC063952.2-201ENST00000498792 1227 ntBASIC21.68■■□□□ 1.06
CDH23Q9H251 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH23Q9H251 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH23Q9H251 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH23Q9H251 NBPF21P-201ENST00000425093 1451 ntBASIC21.68■■□□□ 1.06
CDH23Q9H251 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH23Q9H251 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CDH23Q9H251 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC21.68■■□□□ 1.06
CDH23Q9H251 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC21.68■■□□□ 1.06
CDH23Q9H251 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.68■■□□□ 1.06
CDH23Q9H251 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
CDH23Q9H251 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.68■■□□□ 1.06
CDH23Q9H251 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
CDH23Q9H251 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH23Q9H251 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH23Q9H251 BET1L-202ENST00000332865 533 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH23Q9H251 FAM8A6P-201ENST00000407496 1135 ntBASIC21.67■■□□□ 1.06
CDH23Q9H251 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH23Q9H251 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC21.67■■□□□ 1.06
CDH23Q9H251 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDH23Q9H251 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CDH23Q9H251 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH23Q9H251 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.67■■□□□ 1.06
CDH23Q9H251 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH23Q9H251 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH23Q9H251 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC21.67■■□□□ 1.06
CDH23Q9H251 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH23Q9H251 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CDH23Q9H251 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
CDH23Q9H251 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CDH23Q9H251 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms