Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.01■■□□□ 1.11
CDT1Q9H211 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDT1Q9H211 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC22.01■■□□□ 1.11
CDT1Q9H211 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDT1Q9H211 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.01■■□□□ 1.11
CDT1Q9H211 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC22.01■■□□□ 1.11
CDT1Q9H211 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
CDT1Q9H211 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CDT1Q9H211 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC22■■□□□ 1.11
CDT1Q9H211 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CDT1Q9H211 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC22■■□□□ 1.11
CDT1Q9H211 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDT1Q9H211 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC22■■□□□ 1.11
CDT1Q9H211 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
CDT1Q9H211 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDT1Q9H211 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDT1Q9H211 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CDT1Q9H211 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC22■■□□□ 1.11
CDT1Q9H211 AC005829.2-201ENST00000571422 1056 ntBASIC22■■□□□ 1.11
CDT1Q9H211 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
CDT1Q9H211 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22■■□□□ 1.11
CDT1Q9H211 AC006058.3-201ENST00000606217 1069 ntBASIC22■■□□□ 1.11
CDT1Q9H211 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC22■■□□□ 1.11
CDT1Q9H211 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22■■□□□ 1.11
CDT1Q9H211 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC22■■□□□ 1.11
CDT1Q9H211 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
CDT1Q9H211 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDT1Q9H211 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
CDT1Q9H211 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC21.99■■□□□ 1.11
CDT1Q9H211 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDT1Q9H211 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC21.99■■□□□ 1.11
CDT1Q9H211 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.99■■□□□ 1.11
CDT1Q9H211 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDT1Q9H211 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDT1Q9H211 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
CDT1Q9H211 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CDT1Q9H211 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CDT1Q9H211 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC21.99■■□□□ 1.11
CDT1Q9H211 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 PRORSD1P-201ENST00000295112 541 ntBASIC21.98■■□□□ 1.11
CDT1Q9H211 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 KRT18P29-201ENST00000397031 1267 ntBASIC21.98■■□□□ 1.11
CDT1Q9H211 AC128676.1-201ENST00000454392 318 ntBASIC21.98■■□□□ 1.11
CDT1Q9H211 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC21.98■■□□□ 1.11
CDT1Q9H211 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.98■■□□□ 1.11
CDT1Q9H211 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.98■■□□□ 1.11
CDT1Q9H211 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC21.98■■□□□ 1.11
CDT1Q9H211 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
CDT1Q9H211 AC006557.6-201ENST00000623071 864 ntBASIC21.98■■□□□ 1.11
CDT1Q9H211 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CDT1Q9H211 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.97■■□□□ 1.11
CDT1Q9H211 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDT1Q9H211 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDT1Q9H211 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC21.97■■□□□ 1.11
CDT1Q9H211 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC21.97■■□□□ 1.11
CDT1Q9H211 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CDT1Q9H211 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.97■■□□□ 1.11
CDT1Q9H211 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CDT1Q9H211 PTBP1P-201ENST00000554374 1601 ntBASIC21.97■■□□□ 1.11
CDT1Q9H211 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.97■■□□□ 1.11
CDT1Q9H211 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDT1Q9H211 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDT1Q9H211 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDT1Q9H211 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CDT1Q9H211 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC21.97■■□□□ 1.11
CDT1Q9H211 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
CDT1Q9H211 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDT1Q9H211 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC21.96■■□□□ 1.11
CDT1Q9H211 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDT1Q9H211 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 AC023632.3-201ENST00000521633 145 ntBASIC21.96■■□□□ 1.11
CDT1Q9H211 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CDT1Q9H211 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC21.96■■□□□ 1.11
CDT1Q9H211 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC21.96■■□□□ 1.11
CDT1Q9H211 AC073648.6-201ENST00000641589 218 ntBASIC21.96■■□□□ 1.11
CDT1Q9H211 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.96■■□□□ 1.11
CDT1Q9H211 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.96■■□□□ 1.11
CDT1Q9H211 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CDT1Q9H211 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
CDT1Q9H211 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.95■■□□□ 1.1
CDT1Q9H211 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.95■■□□□ 1.1
CDT1Q9H211 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
CDT1Q9H211 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CDT1Q9H211 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms