Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
RNF38Q9H0F5 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 AL121603.2-201ENST00000557373 2117 ntBASIC21.06■□□□□ 0.96
RNF38Q9H0F5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RNF38Q9H0F5 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 RHOD-202ENST00000532559 538 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF38Q9H0F5 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 BAALC-201ENST00000297574 801 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF38Q9H0F5 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 AL390719.1-204ENST00000412397 1219 ntBASIC21.03■□□□□ 0.96
RNF38Q9H0F5 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF38Q9H0F5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 UBE2SP1-201ENST00000450587 669 ntBASIC21.02■□□□□ 0.96
RNF38Q9H0F5 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 USP36-216ENST00000589424 970 ntTSL 5 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF38Q9H0F5 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
RNF38Q9H0F5 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF38Q9H0F5 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC21.02■□□□□ 0.95
RNF38Q9H0F5 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC21.02■□□□□ 0.95
RNF38Q9H0F5 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC21.01■□□□□ 0.95
RNF38Q9H0F5 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms