Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
AMBRA1Q9C0C7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 KRT87P-202ENST00000534226 1464 ntBASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
AMBRA1Q9C0C7 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 AC079140.4-201ENST00000507448 529 ntBASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DUX4L2-201ENST00000561772 1275 ntBASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DUX4L6-201ENST00000626483 1275 ntBASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DUX4L1-201ENST00000627662 1275 ntBASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DUX4L8-201ENST00000629013 1275 ntBASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DUX4L3-201ENST00000630187 1275 ntBASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DUX4L7-201ENST00000630678 1275 ntBASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 DUX4L5-201ENST00000630834 1275 ntBASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
AMBRA1Q9C0C7 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 AC138907.5-202ENST00000569484 235 ntBASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 AP000974.1-201ENST00000623909 2387 ntBASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.9■□□□□ 0.62
AMBRA1Q9C0C7 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
AMBRA1Q9C0C7 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.89■□□□□ 0.62
AMBRA1Q9C0C7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
AMBRA1Q9C0C7 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 HACD1-201ENST00000326961 773 ntTSL 2 BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 KRT18P14-201ENST00000534205 1250 ntBASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 AC004528.2-201ENST00000610701 440 ntTSL 5 BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.89■□□□□ 0.61
AMBRA1Q9C0C7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms