Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RSPO3Q9BXY4 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 KRT18P5-201ENST00000436075 1291 ntBASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 BX119927.1-201ENST00000636596 1552 ntBASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RSPO3Q9BXY4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 CNN2P6-201ENST00000439038 900 ntBASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 MFSD11-216ENST00000590393 1141 ntBASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 CYP21A1P-202ENST00000354927 1481 ntBASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.65■□□□□ 0.58
RSPO3Q9BXY4 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.64■□□□□ 0.58
RSPO3Q9BXY4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
RSPO3Q9BXY4 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
RSPO3Q9BXY4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
RSPO3Q9BXY4 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.58
RSPO3Q9BXY4 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 FAM21FP-204ENST00000608637 956 ntBASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.64■□□□□ 0.57
RSPO3Q9BXY4 PTBP1P-201ENST00000554374 1601 ntBASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 AL591742.1-201ENST00000604433 565 ntBASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 AC011767.1-201ENST00000617410 1153 ntBASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 AC087633.2-202ENST00000565166 1439 ntBASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
RSPO3Q9BXY4 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms