Protein–RNA interactions for Protein: Q9BT23

LIMD2, LIM domain-containing protein 2, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2Q9BT23 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
LIMD2Q9BT23 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
LIMD2Q9BT23 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
LIMD2Q9BT23 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 KRT16P2-201ENST00000414673 1423 ntBASIC12.02□□□□□ -0.49
LIMD2Q9BT23 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
LIMD2Q9BT23 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DUX4L2-201ENST00000561772 1275 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 AC138907.5-202ENST00000569484 235 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DUX4L6-201ENST00000626483 1275 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DUX4L1-201ENST00000627662 1275 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DUX4L8-201ENST00000629013 1275 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DUX4L3-201ENST00000630187 1275 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DUX4L7-201ENST00000630678 1275 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DUX4L5-201ENST00000630834 1275 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 AC120498.9-201ENST00000339021 3867 ntBASIC12.01□□□□□ -0.49
LIMD2Q9BT23 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC12.01□□□□□ -0.49
LIMD2Q9BT23 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC12□□□□□ -0.49
LIMD2Q9BT23 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC12□□□□□ -0.49
LIMD2Q9BT23 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12□□□□□ -0.49
LIMD2Q9BT23 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC12□□□□□ -0.49
LIMD2Q9BT23 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC12□□□□□ -0.49
LIMD2Q9BT23 PKD1P1-201ENST00000458669 6805 ntBASIC12□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms