Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NICN1Q9BSH3 SERP1-208ENST00000491660 830 ntTSL 2 BASIC17.35■□□□□ 0.37
NICN1Q9BSH3 AL354811.1-201ENST00000610286 706 ntBASIC17.35■□□□□ 0.37
NICN1Q9BSH3 MIR6084-201ENST00000622012 110 ntBASIC17.35■□□□□ 0.37
NICN1Q9BSH3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NICN1Q9BSH3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
NICN1Q9BSH3 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NICN1Q9BSH3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC17.35■□□□□ 0.37
NICN1Q9BSH3 AC125437.2-201ENST00000625180 2167 ntBASIC17.35■□□□□ 0.37
NICN1Q9BSH3 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
NICN1Q9BSH3 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
NICN1Q9BSH3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 MTURN-203ENST00000409688 843 ntTSL 2 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.34■□□□□ 0.37
NICN1Q9BSH3 MIR2861-201ENST00000636310 90 ntBASIC17.34■□□□□ 0.37
NICN1Q9BSH3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NICN1Q9BSH3 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NICN1Q9BSH3 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NICN1Q9BSH3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NICN1Q9BSH3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC17.33■□□□□ 0.37
NICN1Q9BSH3 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NICN1Q9BSH3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.33■□□□□ 0.37
NICN1Q9BSH3 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NICN1Q9BSH3 KRT16P2-201ENST00000414673 1423 ntBASIC17.33■□□□□ 0.36
NICN1Q9BSH3 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NICN1Q9BSH3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 AL158211.5-201ENST00000623583 2518 ntBASIC17.32■□□□□ 0.36
NICN1Q9BSH3 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 AC116562.4-201ENST00000641316 2276 ntBASIC17.32■□□□□ 0.36
NICN1Q9BSH3 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.32■□□□□ 0.36
NICN1Q9BSH3 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 AC138907.5-202ENST00000569484 235 ntBASIC17.32■□□□□ 0.36
NICN1Q9BSH3 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NICN1Q9BSH3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NICN1Q9BSH3 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms