Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS1Q99742 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS1Q99742 AL355802.2-201ENST00000402069 882 ntBASIC18.46■□□□□ 0.55
NPAS1Q99742 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS1Q99742 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.46■□□□□ 0.55
NPAS1Q99742 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS1Q99742 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC18.46■□□□□ 0.55
NPAS1Q99742 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS1Q99742 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.46■□□□□ 0.55
NPAS1Q99742 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
NPAS1Q99742 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
NPAS1Q99742 KRT8P36-201ENST00000489121 1440 ntBASIC18.46■□□□□ 0.55
NPAS1Q99742 FEM1AP1-201ENST00000431297 1995 ntBASIC18.46■□□□□ 0.55
NPAS1Q99742 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.46■□□□□ 0.55
NPAS1Q99742 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
NPAS1Q99742 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.54
NPAS1Q99742 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
NPAS1Q99742 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
NPAS1Q99742 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS1Q99742 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
NPAS1Q99742 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS1Q99742 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS1Q99742 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS1Q99742 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS1Q99742 SLC29A4P1-201ENST00000398760 971 ntBASIC18.45■□□□□ 0.54
NPAS1Q99742 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS1Q99742 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.45■□□□□ 0.54
NPAS1Q99742 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.45■□□□□ 0.54
NPAS1Q99742 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.45■□□□□ 0.54
NPAS1Q99742 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS1Q99742 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.45■□□□□ 0.54
NPAS1Q99742 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
NPAS1Q99742 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.45■□□□□ 0.54
NPAS1Q99742 AL356652.1-201ENST00000615962 565 ntBASIC18.45■□□□□ 0.54
NPAS1Q99742 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS1Q99742 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
NPAS1Q99742 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS1Q99742 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.45■□□□□ 0.54
NPAS1Q99742 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
NPAS1Q99742 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.44■□□□□ 0.54
NPAS1Q99742 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
NPAS1Q99742 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 AC142086.2-201ENST00000569753 217 ntBASIC18.44■□□□□ 0.54
NPAS1Q99742 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.44■□□□□ 0.54
NPAS1Q99742 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
NPAS1Q99742 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
NPAS1Q99742 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.44■□□□□ 0.54
NPAS1Q99742 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.44■□□□□ 0.54
NPAS1Q99742 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.43■□□□□ 0.54
NPAS1Q99742 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.43■□□□□ 0.54
NPAS1Q99742 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.43■□□□□ 0.54
NPAS1Q99742 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.43■□□□□ 0.54
NPAS1Q99742 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
NPAS1Q99742 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 AC105020.6-201ENST00000621523 1217 ntBASIC18.43■□□□□ 0.54
NPAS1Q99742 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
NPAS1Q99742 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.43■□□□□ 0.54
NPAS1Q99742 LINC01006-201ENST00000333319 2292 ntBASIC18.43■□□□□ 0.54
NPAS1Q99742 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
NPAS1Q99742 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
NPAS1Q99742 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS1Q99742 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NPAS1Q99742 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS1Q99742 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NPAS1Q99742 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NPAS1Q99742 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS1Q99742 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS1Q99742 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NPAS1Q99742 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NPAS1Q99742 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS1Q99742 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC18.42■□□□□ 0.54
NPAS1Q99742 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC18.42■□□□□ 0.54
NPAS1Q99742 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
NPAS1Q99742 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS1Q99742 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS1Q99742 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
NPAS1Q99742 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
NPAS1Q99742 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
NPAS1Q99742 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms