Protein–RNA interactions for Protein: Q99590

SCAF11, Protein SCAF11, humanhuman

Known RBP Predictions only

Length 1,463 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11Q99590 KRT16P5-201ENST00000455284 522 ntBASIC29.31■■■□□ 2.28
SCAF11Q99590 NUDT16P1-203ENST00000513809 620 ntBASIC29.31■■■□□ 2.28
SCAF11Q99590 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC29.31■■■□□ 2.28
SCAF11Q99590 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC29.31■■■□□ 2.28
SCAF11Q99590 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
SCAF11Q99590 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC29.3■■■□□ 2.28
SCAF11Q99590 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC29.3■■■□□ 2.28
SCAF11Q99590 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC29.3■■■□□ 2.28
SCAF11Q99590 PGM5P4-201ENST00000421970 445 ntBASIC29.3■■■□□ 2.28
SCAF11Q99590 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC29.3■■■□□ 2.28
SCAF11Q99590 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC29.3■■■□□ 2.28
SCAF11Q99590 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC29.3■■■□□ 2.28
SCAF11Q99590 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC29.3■■■□□ 2.28
SCAF11Q99590 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC29.3■■■□□ 2.28
SCAF11Q99590 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC29.3■■■□□ 2.28
SCAF11Q99590 TERF1P1-201ENST00000311003 1181 ntBASIC29.29■■■□□ 2.28
SCAF11Q99590 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC29.29■■■□□ 2.28
SCAF11Q99590 DUT-205ENST00000558813 769 ntTSL 2 BASIC29.29■■■□□ 2.28
SCAF11Q99590 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC29.29■■■□□ 2.28
SCAF11Q99590 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC29.29■■■□□ 2.28
SCAF11Q99590 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC29.29■■■□□ 2.28
SCAF11Q99590 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
SCAF11Q99590 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SCAF11Q99590 AC133561.1-201ENST00000568600 2415 ntBASIC29.29■■■□□ 2.28
SCAF11Q99590 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC29.29■■■□□ 2.28
SCAF11Q99590 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC29.29■■■□□ 2.28
SCAF11Q99590 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SCAF11Q99590 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC29.29■■■□□ 2.28
SCAF11Q99590 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC29.29■■■□□ 2.28
SCAF11Q99590 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC29.29■■■□□ 2.28
SCAF11Q99590 AP000525.1-201ENST00000608286 694 ntBASIC29.29■■■□□ 2.28
SCAF11Q99590 AL356652.1-201ENST00000615962 565 ntBASIC29.29■■■□□ 2.28
SCAF11Q99590 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC29.29■■■□□ 2.28
SCAF11Q99590 GLDC-219ENST00000640208 420 ntTSL 2 BASIC29.29■■■□□ 2.28
SCAF11Q99590 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC29.29■■■□□ 2.28
SCAF11Q99590 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
SCAF11Q99590 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
SCAF11Q99590 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC29.28■■■□□ 2.28
SCAF11Q99590 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
SCAF11Q99590 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC29.28■■■□□ 2.28
SCAF11Q99590 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SCAF11Q99590 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SCAF11Q99590 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SCAF11Q99590 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC29.28■■■□□ 2.28
SCAF11Q99590 HES2-206ENST00000489730 730 ntTSL 2 BASIC29.28■■■□□ 2.28
SCAF11Q99590 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC29.28■■■□□ 2.28
SCAF11Q99590 REXO1L10P-201ENST00000615707 1290 ntBASIC29.28■■■□□ 2.28
SCAF11Q99590 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
SCAF11Q99590 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC29.28■■■□□ 2.28
SCAF11Q99590 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC29.27■■■□□ 2.28
SCAF11Q99590 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SCAF11Q99590 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC29.27■■■□□ 2.28
SCAF11Q99590 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC29.27■■■□□ 2.28
SCAF11Q99590 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC29.27■■■□□ 2.28
SCAF11Q99590 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SCAF11Q99590 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SCAF11Q99590 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SCAF11Q99590 FDX2-207ENST00000494368 584 ntTSL 4 BASIC29.27■■■□□ 2.28
SCAF11Q99590 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
SCAF11Q99590 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC29.27■■■□□ 2.28
SCAF11Q99590 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC29.27■■■□□ 2.28
SCAF11Q99590 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC29.26■■■□□ 2.28
SCAF11Q99590 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC29.26■■■□□ 2.28
SCAF11Q99590 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
SCAF11Q99590 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SCAF11Q99590 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SCAF11Q99590 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
SCAF11Q99590 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC29.26■■■□□ 2.27
SCAF11Q99590 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC29.26■■■□□ 2.27
SCAF11Q99590 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC29.26■■■□□ 2.27
SCAF11Q99590 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC29.26■■■□□ 2.27
SCAF11Q99590 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC29.26■■■□□ 2.27
SCAF11Q99590 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC29.26■■■□□ 2.27
SCAF11Q99590 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC29.26■■■□□ 2.27
SCAF11Q99590 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SCAF11Q99590 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC29.25■■■□□ 2.27
SCAF11Q99590 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SCAF11Q99590 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SCAF11Q99590 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SCAF11Q99590 AL121829.2-201ENST00000620908 328 ntBASIC29.25■■■□□ 2.27
SCAF11Q99590 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC29.25■■■□□ 2.27
SCAF11Q99590 AC073508.3-201ENST00000619697 1419 ntBASIC29.25■■■□□ 2.27
SCAF11Q99590 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC29.25■■■□□ 2.27
SCAF11Q99590 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC29.25■■■□□ 2.27
SCAF11Q99590 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SCAF11Q99590 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SCAF11Q99590 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SCAF11Q99590 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC29.24■■■□□ 2.27
SCAF11Q99590 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC29.24■■■□□ 2.27
SCAF11Q99590 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC29.24■■■□□ 2.27
SCAF11Q99590 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC29.24■■■□□ 2.27
SCAF11Q99590 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC29.24■■■□□ 2.27
SCAF11Q99590 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC29.24■■■□□ 2.27
SCAF11Q99590 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC29.24■■■□□ 2.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms