Protein–RNA interactions for Protein: Q99466

NOTCH4, Neurogenic locus notch homolog protein 4, humanhuman

Predictions only

Length 2,003 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH4Q99466 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.07■□□□□ 0.96
NOTCH4Q99466 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.07■□□□□ 0.96
NOTCH4Q99466 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC21.07■□□□□ 0.96
NOTCH4Q99466 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC21.07■□□□□ 0.96
NOTCH4Q99466 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
NOTCH4Q99466 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.06■□□□□ 0.96
NOTCH4Q99466 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NOTCH4Q99466 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NOTCH4Q99466 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
NOTCH4Q99466 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC21.06■□□□□ 0.96
NOTCH4Q99466 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.06■□□□□ 0.96
NOTCH4Q99466 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
NOTCH4Q99466 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.06■□□□□ 0.96
NOTCH4Q99466 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.06■□□□□ 0.96
NOTCH4Q99466 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NOTCH4Q99466 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
NOTCH4Q99466 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.06■□□□□ 0.96
NOTCH4Q99466 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC21.05■□□□□ 0.96
NOTCH4Q99466 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.05■□□□□ 0.96
NOTCH4Q99466 PRKY-204ENST00000533551 1019 ntBASIC21.05■□□□□ 0.96
NOTCH4Q99466 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC21.05■□□□□ 0.96
NOTCH4Q99466 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC21.05■□□□□ 0.96
NOTCH4Q99466 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 AC027702.1-201ENST00000563810 1770 ntBASIC21.05■□□□□ 0.96
NOTCH4Q99466 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 RCN1P1-201ENST00000400413 996 ntBASIC21.05■□□□□ 0.96
NOTCH4Q99466 MIR1224-201ENST00000408193 85 ntBASIC21.05■□□□□ 0.96
NOTCH4Q99466 FAM210CP-201ENST00000445714 574 ntBASIC21.05■□□□□ 0.96
NOTCH4Q99466 AL353708.3-201ENST00000610272 989 ntBASIC21.05■□□□□ 0.96
NOTCH4Q99466 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC21.05■□□□□ 0.96
NOTCH4Q99466 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
NOTCH4Q99466 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
NOTCH4Q99466 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NOTCH4Q99466 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOTCH4Q99466 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC21.04■□□□□ 0.96
NOTCH4Q99466 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
NOTCH4Q99466 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOTCH4Q99466 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NOTCH4Q99466 KRT16P5-201ENST00000455284 522 ntBASIC21.04■□□□□ 0.96
NOTCH4Q99466 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC21.04■□□□□ 0.96
NOTCH4Q99466 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC21.04■□□□□ 0.96
NOTCH4Q99466 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NOTCH4Q99466 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC21.04■□□□□ 0.96
NOTCH4Q99466 AP001412.1-201ENST00000608405 714 ntBASIC21.04■□□□□ 0.96
NOTCH4Q99466 AL121906.2-201ENST00000621597 723 ntBASIC21.04■□□□□ 0.96
NOTCH4Q99466 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
NOTCH4Q99466 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
NOTCH4Q99466 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOTCH4Q99466 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
NOTCH4Q99466 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOTCH4Q99466 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOTCH4Q99466 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOTCH4Q99466 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
NOTCH4Q99466 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOTCH4Q99466 KRT8P9-201ENST00000558927 1449 ntBASIC21.03■□□□□ 0.96
NOTCH4Q99466 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
NOTCH4Q99466 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.03■□□□□ 0.96
NOTCH4Q99466 AC023632.3-201ENST00000521633 145 ntBASIC21.03■□□□□ 0.96
NOTCH4Q99466 AC133561.5-201ENST00000635547 218 ntBASIC21.03■□□□□ 0.96
NOTCH4Q99466 AC097493.4-201ENST00000641197 219 ntBASIC21.03■□□□□ 0.96
NOTCH4Q99466 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC21.03■□□□□ 0.96
NOTCH4Q99466 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC21.03■□□□□ 0.96
NOTCH4Q99466 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
NOTCH4Q99466 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 AL024507.2-201ENST00000606070 2574 ntBASIC21.02■□□□□ 0.96
NOTCH4Q99466 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
NOTCH4Q99466 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.02■□□□□ 0.96
NOTCH4Q99466 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 17.3 ms