Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.42■□□□□ 0.54
SPENQ96T58 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
SPENQ96T58 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.42■□□□□ 0.54
SPENQ96T58 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.42■□□□□ 0.54
SPENQ96T58 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.42■□□□□ 0.54
SPENQ96T58 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.42■□□□□ 0.54
SPENQ96T58 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.42■□□□□ 0.54
SPENQ96T58 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.42■□□□□ 0.54
SPENQ96T58 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SPENQ96T58 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPENQ96T58 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
SPENQ96T58 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.41■□□□□ 0.54
SPENQ96T58 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC18.41■□□□□ 0.54
SPENQ96T58 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPENQ96T58 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SPENQ96T58 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.41■□□□□ 0.54
SPENQ96T58 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPENQ96T58 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.41■□□□□ 0.54
SPENQ96T58 AC006557.6-201ENST00000623071 864 ntBASIC18.41■□□□□ 0.54
SPENQ96T58 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SPENQ96T58 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.41■□□□□ 0.54
SPENQ96T58 AC245052.3-201ENST00000450182 901 ntBASIC18.41■□□□□ 0.54
SPENQ96T58 AC010947.1-201ENST00000623454 693 ntBASIC18.41■□□□□ 0.54
SPENQ96T58 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPENQ96T58 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPENQ96T58 AC079598.2-202ENST00000546624 1451 ntBASIC18.4■□□□□ 0.54
SPENQ96T58 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
SPENQ96T58 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.4■□□□□ 0.54
SPENQ96T58 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPENQ96T58 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPENQ96T58 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC18.4■□□□□ 0.54
SPENQ96T58 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.4■□□□□ 0.54
SPENQ96T58 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SPENQ96T58 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.4■□□□□ 0.54
SPENQ96T58 AP000525.1-201ENST00000608286 694 ntBASIC18.4■□□□□ 0.54
SPENQ96T58 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPENQ96T58 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC18.4■□□□□ 0.54
SPENQ96T58 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SPENQ96T58 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.4■□□□□ 0.54
SPENQ96T58 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.4■□□□□ 0.54
SPENQ96T58 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC18.39■□□□□ 0.54
SPENQ96T58 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SPENQ96T58 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.39■□□□□ 0.53
SPENQ96T58 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.39■□□□□ 0.53
SPENQ96T58 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.39■□□□□ 0.53
SPENQ96T58 AL049597.2-201ENST00000565575 961 ntBASIC18.39■□□□□ 0.53
SPENQ96T58 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.39■□□□□ 0.53
SPENQ96T58 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SPENQ96T58 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC18.39■□□□□ 0.53
SPENQ96T58 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.38■□□□□ 0.53
SPENQ96T58 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.38■□□□□ 0.53
SPENQ96T58 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.38■□□□□ 0.53
SPENQ96T58 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.38■□□□□ 0.53
SPENQ96T58 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SPENQ96T58 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.38■□□□□ 0.53
SPENQ96T58 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.38■□□□□ 0.53
SPENQ96T58 RPS15-203ENST00000586096 570 ntTSL 2 BASIC18.38■□□□□ 0.53
SPENQ96T58 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.38■□□□□ 0.53
SPENQ96T58 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SPENQ96T58 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.38■□□□□ 0.53
SPENQ96T58 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SPENQ96T58 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SPENQ96T58 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SPENQ96T58 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SPENQ96T58 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SPENQ96T58 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.37■□□□□ 0.53
SPENQ96T58 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms