Protein–RNA interactions for Protein: Q96NU0

CNTNAP3B, Contactin-associated protein-like 3B, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3BQ96NU0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 KRT16P5-201ENST00000455284 522 ntBASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNTNAP3BQ96NU0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.39■□□□□ 0.7
CNTNAP3BQ96NU0 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 AC117947.1-201ENST00000427448 529 ntBASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 FAM86EP-206ENST00000510506 987 ntBASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNTNAP3BQ96NU0 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 AC091390.4-202ENST00000476426 537 ntBASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CNTNAP3BQ96NU0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 ECEL1P2-202ENST00000465689 757 ntBASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CNTNAP3BQ96NU0 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 AC005829.2-201ENST00000571422 1056 ntBASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 CR769767.2-201ENST00000622735 460 ntBASIC19.36■□□□□ 0.69
CNTNAP3BQ96NU0 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.35■□□□□ 0.69
CNTNAP3BQ96NU0 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms