Protein–RNA interactions for Protein: Q96LR5

UBE2E2, Ubiquitin-conjugating enzyme E2 E2, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E2Q96LR5 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
UBE2E2Q96LR5 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
UBE2E2Q96LR5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC15.71■□□□□ 0.1
UBE2E2Q96LR5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC15.71■□□□□ 0.1
UBE2E2Q96LR5 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
UBE2E2Q96LR5 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC15.71■□□□□ 0.1
UBE2E2Q96LR5 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC15.71■□□□□ 0.1
UBE2E2Q96LR5 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 TSPY20P-201ENST00000450910 630 ntBASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 PNMA6B-201ENST00000538162 1200 ntBASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
UBE2E2Q96LR5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 ABHD17AP1-201ENST00000358206 933 ntBASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 POU5F1P3-201ENST00000428824 1078 ntBASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 MIR4651-201ENST00000582622 73 ntBASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC15.69■□□□□ 0.1
UBE2E2Q96LR5 AC005229.4-201ENST00000610085 2198 ntBASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 GGT1-206ENST00000404223 952 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 OR2A1-AS1-207ENST00000486094 819 ntBASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 REXO2-208ENST00000539754 791 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC15.68■□□□□ 0.1
UBE2E2Q96LR5 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 ESRRAP1-201ENST00000400596 1257 ntBASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 AL390719.1-204ENST00000412397 1219 ntBASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC15.67■□□□□ 0.1
UBE2E2Q96LR5 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms