Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC20.36■□□□□ 0.85
CHMP6Q96FZ7 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 DUX4L19-201ENST00000557448 1267 ntBASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
CHMP6Q96FZ7 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.34■□□□□ 0.85
CHMP6Q96FZ7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 AC010525.1-201ENST00000585559 441 ntBASIC20.33■□□□□ 0.85
CHMP6Q96FZ7 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP6Q96FZ7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.33■□□□□ 0.84
CHMP6Q96FZ7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CHMP6Q96FZ7 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP6Q96FZ7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CHMP6Q96FZ7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC20.33■□□□□ 0.84
CHMP6Q96FZ7 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 SERBP1P1-201ENST00000396021 1160 ntBASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 HES6-206ENST00000409574 738 ntTSL 2 BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CHMP6Q96FZ7 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms