Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CPNE2Q96FN4 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CPNE2Q96FN4 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CPNE2Q96FN4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 AC123595.1-201ENST00000440769 1046 ntBASIC17.52■□□□□ 0.4
CPNE2Q96FN4 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 AC105265.2-201ENST00000467189 838 ntBASIC17.52■□□□□ 0.4
CPNE2Q96FN4 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 AL162377.1-201ENST00000618844 1793 ntBASIC17.52■□□□□ 0.4
CPNE2Q96FN4 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.52■□□□□ 0.4
CPNE2Q96FN4 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC17.52■□□□□ 0.39
CPNE2Q96FN4 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
CPNE2Q96FN4 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE2Q96FN4 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.52■□□□□ 0.39
CPNE2Q96FN4 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
CPNE2Q96FN4 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 AC087289.5-201ENST00000586076 3175 ntBASIC17.51■□□□□ 0.39
CPNE2Q96FN4 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 AP001160.3-201ENST00000601484 763 ntBASIC17.51■□□□□ 0.39
CPNE2Q96FN4 MIR2861-201ENST00000636310 90 ntBASIC17.51■□□□□ 0.39
CPNE2Q96FN4 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
CPNE2Q96FN4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.5■□□□□ 0.39
CPNE2Q96FN4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms