Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RTP4Q96DX8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
RTP4Q96DX8 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC20.7■□□□□ 0.91
RTP4Q96DX8 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.91
RTP4Q96DX8 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC20.7■□□□□ 0.9
RTP4Q96DX8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTP4Q96DX8 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.7■□□□□ 0.9
RTP4Q96DX8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RTP4Q96DX8 MFSD11-216ENST00000590393 1141 ntBASIC20.7■□□□□ 0.9
RTP4Q96DX8 RAP2CP1-201ENST00000605103 478 ntBASIC20.7■□□□□ 0.9
RTP4Q96DX8 AC016405.3-201ENST00000607710 860 ntBASIC20.7■□□□□ 0.9
RTP4Q96DX8 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTP4Q96DX8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTP4Q96DX8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.7■□□□□ 0.9
RTP4Q96DX8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.7■□□□□ 0.9
RTP4Q96DX8 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTP4Q96DX8 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RTP4Q96DX8 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RTP4Q96DX8 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
RTP4Q96DX8 PCDHAC2-203ENST00000615316 3011 ntBASIC20.7■□□□□ 0.9
RTP4Q96DX8 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 HLA-L-209ENST00000420110 1011 ntBASIC20.69■□□□□ 0.9
RTP4Q96DX8 CDCA4P2-201ENST00000441182 718 ntBASIC20.69■□□□□ 0.9
RTP4Q96DX8 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 TK2-208ENST00000545043 1120 ntTSL 2 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 AC073111.5-205ENST00000641717 521 ntBASIC20.69■□□□□ 0.9
RTP4Q96DX8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.69■□□□□ 0.9
RTP4Q96DX8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RTP4Q96DX8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTP4Q96DX8 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
RTP4Q96DX8 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
RTP4Q96DX8 BX119927.1-201ENST00000636596 1552 ntBASIC20.68■□□□□ 0.9
RTP4Q96DX8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTP4Q96DX8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTP4Q96DX8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RTP4Q96DX8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTP4Q96DX8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTP4Q96DX8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC20.68■□□□□ 0.9
RTP4Q96DX8 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.68■□□□□ 0.9
RTP4Q96DX8 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.68■□□□□ 0.9
RTP4Q96DX8 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC20.68■□□□□ 0.9
RTP4Q96DX8 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RTP4Q96DX8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 BID-214ENST00000617586 542 ntTSL 5 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RTP4Q96DX8 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.67■□□□□ 0.9
RTP4Q96DX8 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 CNN2P6-201ENST00000439038 900 ntBASIC20.66■□□□□ 0.9
RTP4Q96DX8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
RTP4Q96DX8 AC100791.3-201ENST00000617619 330 ntBASIC20.66■□□□□ 0.9
RTP4Q96DX8 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms