Protein–RNA interactions for Protein: Q96CG3

TIFA, TRAF-interacting protein with FHA domain-containing protein A, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIFAQ96CG3 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC21.79■■□□□ 1.08
TIFAQ96CG3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 KRT18P56-201ENST00000507275 550 ntBASIC21.79■■□□□ 1.08
TIFAQ96CG3 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC21.79■■□□□ 1.08
TIFAQ96CG3 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC21.79■■□□□ 1.08
TIFAQ96CG3 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC21.79■■□□□ 1.08
TIFAQ96CG3 AC004264.1-201ENST00000608354 794 ntBASIC21.79■■□□□ 1.08
TIFAQ96CG3 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TIFAQ96CG3 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.79■■□□□ 1.08
TIFAQ96CG3 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIFAQ96CG3 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIFAQ96CG3 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC21.78■■□□□ 1.08
TIFAQ96CG3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIFAQ96CG3 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TIFAQ96CG3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TIFAQ96CG3 AC116562.2-201ENST00000507042 360 ntBASIC21.78■■□□□ 1.08
TIFAQ96CG3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC21.78■■□□□ 1.08
TIFAQ96CG3 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.78■■□□□ 1.08
TIFAQ96CG3 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TIFAQ96CG3 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
TIFAQ96CG3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.78■■□□□ 1.08
TIFAQ96CG3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC21.78■■□□□ 1.08
TIFAQ96CG3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
TIFAQ96CG3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.77■■□□□ 1.08
TIFAQ96CG3 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.77■■□□□ 1.08
TIFAQ96CG3 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.77■■□□□ 1.08
TIFAQ96CG3 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC21.77■■□□□ 1.08
TIFAQ96CG3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.77■■□□□ 1.08
TIFAQ96CG3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.08
TIFAQ96CG3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC21.77■■□□□ 1.08
TIFAQ96CG3 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC21.77■■□□□ 1.08
TIFAQ96CG3 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TIFAQ96CG3 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
TIFAQ96CG3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TIFAQ96CG3 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIFAQ96CG3 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TIFAQ96CG3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TIFAQ96CG3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIFAQ96CG3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
TIFAQ96CG3 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIFAQ96CG3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TIFAQ96CG3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 AC026471.6-201ENST00000622954 1905 ntBASIC21.76■■□□□ 1.07
TIFAQ96CG3 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC21.76■■□□□ 1.07
TIFAQ96CG3 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC21.76■■□□□ 1.07
TIFAQ96CG3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 AC010542.4-201ENST00000563151 1910 ntBASIC21.75■■□□□ 1.07
TIFAQ96CG3 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 CR392000.1-201ENST00000624770 1228 ntBASIC21.75■■□□□ 1.07
TIFAQ96CG3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TIFAQ96CG3 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC21.75■■□□□ 1.07
TIFAQ96CG3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
TIFAQ96CG3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC21.74■■□□□ 1.07
TIFAQ96CG3 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TIFAQ96CG3 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms