Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
APH1AQ96BI3 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
APH1AQ96BI3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.96■□□□□ 0.47
APH1AQ96BI3 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
APH1AQ96BI3 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 AC083880.1-201ENST00000608266 535 ntBASIC17.95■□□□□ 0.46
APH1AQ96BI3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
APH1AQ96BI3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
APH1AQ96BI3 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
APH1AQ96BI3 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.94■□□□□ 0.46
APH1AQ96BI3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
APH1AQ96BI3 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APH1AQ96BI3 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
APH1AQ96BI3 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.94■□□□□ 0.46
APH1AQ96BI3 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
APH1AQ96BI3 KRT18P6-201ENST00000555540 1265 ntBASIC17.94■□□□□ 0.46
APH1AQ96BI3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.94■□□□□ 0.46
APH1AQ96BI3 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APH1AQ96BI3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC17.94■□□□□ 0.46
APH1AQ96BI3 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
APH1AQ96BI3 AL121603.2-201ENST00000557373 2117 ntBASIC17.93■□□□□ 0.46
APH1AQ96BI3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 MFF-205ENST00000354503 1085 ntTSL 2 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 AIRN-201ENST00000601203 4374 ntBASIC17.93■□□□□ 0.46
APH1AQ96BI3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
APH1AQ96BI3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.93■□□□□ 0.46
APH1AQ96BI3 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APH1AQ96BI3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APH1AQ96BI3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APH1AQ96BI3 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
APH1AQ96BI3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC17.92■□□□□ 0.46
APH1AQ96BI3 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.92■□□□□ 0.46
APH1AQ96BI3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
APH1AQ96BI3 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
APH1AQ96BI3 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
APH1AQ96BI3 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.92■□□□□ 0.46
APH1AQ96BI3 CD99P1-205ENST00000527459 561 ntBASIC17.92■□□□□ 0.46
APH1AQ96BI3 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.92■□□□□ 0.46
APH1AQ96BI3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
APH1AQ96BI3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
APH1AQ96BI3 CRK-204ENST00000574295 1391 ntTSL 5 BASIC17.91■□□□□ 0.46
APH1AQ96BI3 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC17.91■□□□□ 0.46
APH1AQ96BI3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.91■□□□□ 0.46
APH1AQ96BI3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 RNA5SP413-201ENST00000516373 109 ntBASIC17.91■□□□□ 0.46
APH1AQ96BI3 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.91■□□□□ 0.46
APH1AQ96BI3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
APH1AQ96BI3 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
APH1AQ96BI3 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
APH1AQ96BI3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
APH1AQ96BI3 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
APH1AQ96BI3 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms