Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 HLA-B-256ENST00000639848 1089 ntBASIC19.09■□□□□ 0.65
TM9SF4Q92544 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC19.09■□□□□ 0.65
TM9SF4Q92544 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.09■□□□□ 0.65
TM9SF4Q92544 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TM9SF4Q92544 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TM9SF4Q92544 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
TM9SF4Q92544 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
TM9SF4Q92544 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TM9SF4Q92544 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TM9SF4Q92544 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TM9SF4Q92544 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.08■□□□□ 0.65
TM9SF4Q92544 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
TM9SF4Q92544 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TM9SF4Q92544 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.08■□□□□ 0.65
TM9SF4Q92544 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TM9SF4Q92544 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TM9SF4Q92544 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
TM9SF4Q92544 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.08■□□□□ 0.64
TM9SF4Q92544 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
TM9SF4Q92544 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.07■□□□□ 0.64
TM9SF4Q92544 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
TM9SF4Q92544 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.07■□□□□ 0.64
TM9SF4Q92544 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC19.07■□□□□ 0.64
TM9SF4Q92544 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.07■□□□□ 0.64
TM9SF4Q92544 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC19.07■□□□□ 0.64
TM9SF4Q92544 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
TM9SF4Q92544 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TM9SF4Q92544 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
TM9SF4Q92544 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 KRT17P1-201ENST00000399211 1546 ntBASIC19.06■□□□□ 0.64
TM9SF4Q92544 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 AL355472.2-201ENST00000422958 438 ntBASIC19.06■□□□□ 0.64
TM9SF4Q92544 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.06■□□□□ 0.64
TM9SF4Q92544 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC19.06■□□□□ 0.64
TM9SF4Q92544 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.06■□□□□ 0.64
TM9SF4Q92544 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.06■□□□□ 0.64
TM9SF4Q92544 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TM9SF4Q92544 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
TM9SF4Q92544 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM9SF4Q92544 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.05■□□□□ 0.64
TM9SF4Q92544 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM9SF4Q92544 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM9SF4Q92544 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM9SF4Q92544 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.05■□□□□ 0.64
TM9SF4Q92544 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
TM9SF4Q92544 AC007322.3-201ENST00000426526 701 ntBASIC19.05■□□□□ 0.64
TM9SF4Q92544 RPS2P4-201ENST00000476944 856 ntBASIC19.05■□□□□ 0.64
TM9SF4Q92544 UNC93B4-201ENST00000505679 747 ntBASIC19.05■□□□□ 0.64
TM9SF4Q92544 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.05■□□□□ 0.64
TM9SF4Q92544 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
TM9SF4Q92544 AC073648.6-201ENST00000641589 218 ntBASIC19.05■□□□□ 0.64
TM9SF4Q92544 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
TM9SF4Q92544 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
TM9SF4Q92544 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TM9SF4Q92544 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM9SF4Q92544 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM9SF4Q92544 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TM9SF4Q92544 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM9SF4Q92544 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 KRT18P68-201ENST00000392293 1000 ntBASIC19.04■□□□□ 0.64
TM9SF4Q92544 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM9SF4Q92544 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TM9SF4Q92544 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.04■□□□□ 0.64
TM9SF4Q92544 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms