Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.5■■□□□ 1.83
RTF1Q92541 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.5■■□□□ 1.83
RTF1Q92541 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC26.5■■□□□ 1.83
RTF1Q92541 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC26.5■■□□□ 1.83
RTF1Q92541 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 KLF2-202ENST00000592003 564 ntTSL 3 BASIC26.5■■□□□ 1.83
RTF1Q92541 AC069544.1-201ENST00000609399 999 ntBASIC26.5■■□□□ 1.83
RTF1Q92541 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC26.5■■□□□ 1.83
RTF1Q92541 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.5■■□□□ 1.83
RTF1Q92541 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
RTF1Q92541 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.49■■□□□ 1.83
RTF1Q92541 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
RTF1Q92541 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC26.49■■□□□ 1.83
RTF1Q92541 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC26.49■■□□□ 1.83
RTF1Q92541 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTF1Q92541 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RTF1Q92541 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.49■■□□□ 1.83
RTF1Q92541 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTF1Q92541 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.49■■□□□ 1.83
RTF1Q92541 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.49■■□□□ 1.83
RTF1Q92541 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RTF1Q92541 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.49■■□□□ 1.83
RTF1Q92541 AC233263.1-201ENST00000578059 224 ntBASIC26.49■■□□□ 1.83
RTF1Q92541 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
RTF1Q92541 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTF1Q92541 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC26.49■■□□□ 1.83
RTF1Q92541 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC26.49■■□□□ 1.83
RTF1Q92541 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTF1Q92541 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RTF1Q92541 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTF1Q92541 RER1-204ENST00000378518 522 ntTSL 3 BASIC26.48■■□□□ 1.83
RTF1Q92541 ABHD17AP6-201ENST00000458502 1044 ntBASIC26.48■■□□□ 1.83
RTF1Q92541 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
RTF1Q92541 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC26.48■■□□□ 1.83
RTF1Q92541 AC093827.2-201ENST00000512654 315 ntBASIC26.48■■□□□ 1.83
RTF1Q92541 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.48■■□□□ 1.83
RTF1Q92541 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.48■■□□□ 1.83
RTF1Q92541 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26.48■■□□□ 1.83
RTF1Q92541 AC120498.8-201ENST00000614275 531 ntBASIC26.48■■□□□ 1.83
RTF1Q92541 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTF1Q92541 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTF1Q92541 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
RTF1Q92541 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTF1Q92541 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
RTF1Q92541 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
RTF1Q92541 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
RTF1Q92541 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC26.47■■□□□ 1.83
RTF1Q92541 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC26.47■■□□□ 1.83
RTF1Q92541 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.47■■□□□ 1.83
RTF1Q92541 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC26.47■■□□□ 1.83
RTF1Q92541 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
RTF1Q92541 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
RTF1Q92541 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC26.46■■□□□ 1.83
RTF1Q92541 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC26.46■■□□□ 1.83
RTF1Q92541 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.46■■□□□ 1.83
RTF1Q92541 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC26.46■■□□□ 1.83
RTF1Q92541 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 C1QBPP2-201ENST00000528754 825 ntBASIC26.46■■□□□ 1.83
RTF1Q92541 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC26.46■■□□□ 1.83
RTF1Q92541 RN7SL471P-201ENST00000580476 299 ntBASIC26.46■■□□□ 1.83
RTF1Q92541 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 AP006294.2-201ENST00000641667 209 ntBASIC26.46■■□□□ 1.83
RTF1Q92541 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC26.46■■□□□ 1.83
RTF1Q92541 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
RTF1Q92541 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC26.46■■□□□ 1.83
RTF1Q92541 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC26.45■■□□□ 1.83
RTF1Q92541 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.83
RTF1Q92541 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
RTF1Q92541 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
RTF1Q92541 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
RTF1Q92541 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
RTF1Q92541 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC26.45■■□□□ 1.82
RTF1Q92541 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC26.45■■□□□ 1.82
RTF1Q92541 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
RTF1Q92541 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC26.45■■□□□ 1.82
RTF1Q92541 AL359736.2-201ENST00000621992 437 ntBASIC26.45■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms