Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 MIR663A-201ENST00000385250 93 ntBASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 AC100791.3-201ENST00000617619 330 ntBASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PCDH19Q8TAB3 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 PGM5P4-201ENST00000421970 445 ntBASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.94■□□□□ 0.94
PCDH19Q8TAB3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 DPP3P2-201ENST00000416030 1696 ntBASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 PCDHAC2-203ENST00000615316 3011 ntBASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 MCRIP2P1-201ENST00000394346 511 ntBASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
PCDH19Q8TAB3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 STK25-205ENST00000405883 1904 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 AC069236.1-201ENST00000604339 616 ntBASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.92■□□□□ 0.94
PCDH19Q8TAB3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.91■□□□□ 0.94
PCDH19Q8TAB3 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms